NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS21319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21319.1 Public Mus musculus 7 Oca2 23 108 98 CCDS HistoryNCBI Gene:18431Re-query CCDS DB by CCDS ID:21319.1Re-query CCDS DB by GeneID:18431See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21319.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000032633.11 ENSMUSP00000032633.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000032633.11Link to Ensembl Protein Viewer:ENSMUSP00000032633.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000032633Re-query CCDS DB by Protein ID:ENSMUSP00000032633
Original member Current member NCBI NM_021879.3 NP_068679.1 Accepted alive Link to Nucleotide Sequence:NM_021879.3Link to Protein Sequence:NP_068679.1Re-query CCDS DB by Nucleotide ID:NM_021879Re-query CCDS DB by Protein ID:NP_068679Link to BLAST:NP_068679.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_068679.1 833 Q62052 833 100% 0 0

Chromosomal Locations for CCDS 21319.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 56254788 56255032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56277371 56277439 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56280751 56280939 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56283462 56283519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56284591 56284663 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56293715 56293875 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56295441 56295520 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56297100 56297253 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56314735 56314806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56316363 56316428 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56321494 56321550 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56323574 56323698 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56324654 56324792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56327254 56327386 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56328707 56328854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56330318 56330375 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56331959 56332067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56357103 56357230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56413731 56413790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56414383 56414487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56423288 56423381 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56429312 56429405 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 56535945 56536029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2502 nt):
ATGCGCCTAGAGAACAAAGACATCAGGCTGGCCTCAGCCGTGCTGGAAGTAGAGCTACACCAGACATCTG
CTTTGTCGGTCCCAACTTGCCCAGACCCAGGACGGCTGCTGACCGTCAAACCTGCTACCAGTAACTACAA
GCTGGGCCAGGCAGACCCCTGCATCCCATATGCTGGCGAGGCTGCTGGGAAGAGCGTCTGTGTTCCTGAA
CATACAGAGTTTGGCTCATTCCTCGTGAAGGGGAGCTCCAGCTTAAAAGACCTTTCTTTTAAGGAAGACA
CTCCTCTGCTCTGGAATTCATCCCAAAAGAAAAGGTCACAGCTCATGCCTGTTCATCACCCAGAATTCAT
AGCTACTGAAGGTTCCTGGGAAAATGGCCTTACTGCCTGGGAGCAAAAATGCATGCTGGGTAAAGAGGTT
GCTGATTTGTCTGCATTGGCCTCCTCAGAGAAACGGGATCTTGCAGGCAGTGTCCATCTTAGAGCCCAGG
TCTCCAAGCTTGGGTGCTGTGTGCGGTGGATAAAGATCACAGGCTTGTTTGTTTTCGTGGTGCTCTGCTC
TATTTTATTCAGCCTGTATCCGGACCAAGGAAAGTTCTGGCAGCTGTTGGCTGTGTCACCGCTGGAAAAC
TACTCTGTGAACCTCAGTGGTCACGCGGACTCCATGATACTTCAGCTGGACCTGGCAGGGGCCTTAATGG
CTGGAGGACCAAGTGGTTCCGGGAAAGAAGAACATGTCGTGGTGGTGGTGACCCAGACAGACGCAGCGGG
CAACAGACGGCGGCGACCACAGCAGCTCACCTACAATTGGACTGTCCTTTTAAATCCAAGAAGTGAGCAC
GTGGTGGTGAGCAGAACCTTTGAGATAGTGAGCAGGGAGGCTGTTTCCATCAGCATCCAGGCCTCTCTCC
AACAGACTCGCCTCGTTCCTCTTTTGCTGGCCCATCAGTTCCTTGGGGCAAGCGTTGAAGCACAAGTGGC
CAGTGCGGTGGCAATCCTTGCAGGGGTTTATACTCTGATCATATTTGAGATTGTTCACAGAACCCTGGCA
GCCATGTTGGGAGCACTTGCAGCACTAGCAGCCTTGGCTGTGGTTGGAGATAGACCCAGCCTGACCCACG
TGGTGGAGTGGATTGATTTCGAGACTCTGGCCCTGCTGTTTGGCATGATGATCTTAGTAGCCGTATTTTC
AGAAACAGGATTTTTTGATTACTGTGCTGTAAAGGCATATCAACTTTCTCGAGGAAGAGTGTGGGCCATG
ATCTTCATGCTTTGTCTCATGGCTGCCATCCTTTCTGCCTTCTTAGACAATGTCACTACGATGCTCCTTT
TTACCCCTGTCACCATAAGGTTATGTGAAGTGCTCAATCTTGATCCGAGACAAGTCCTCATTGCAGAAGT
GATCTTCACAAACATTGGAGGAGCTGCCACTGCTATTGGGGACCCACCAAATGTTATCATTGTTTCCAAT
CAGGAGTTGAGAAAAATGGGCCTGGACTTCGCTGGTTTCACAGCACACATGTTCCTGGGAATTTGCCTTG
TTCTCCTGGTCTCCTTTCCCCTCCTCAGACTTCTGTACTGGAACAAAAAGCTTTATAACAAGGAGCCTAG
TGAGATCGTCGAACTGAAGCATGAGATTCATGTCTGGCGTTTGACTGCCCAGCGCATCAGTCCAGCCAGC
CGTGAGGAGACAGCTGTGCGTGGCTTGCTGCTGGAGAAAGTGCTTGCCCTGGAGCATCTGCTGGCTCAAA
GGTTGCACACTTTCCACAGGCAAATTTCACAGGAAGACAAAAATTGGGAGACCAATATTCAAGAGCTACA
AAGAAAGCACAGGATTTCAGACAGGAGTCTGCTTGTCAAGTGCCTGACGGTGCTGGGATTTGTCATCTCC
ATGTTCTTTCTCAACTCCTTTGTCCCTGGCATTCATCTTGATCTTGGATGGATTGCTATTCTGGGTGCCA
TCTGGTTGCTAATTTTAGCTGATATTCATGACTTTGAGATCATTCTACACAGAGTAGAGTGGGCGACTCT
TCTCTTCTTTGCAGCACTCTTTGTGCTGATGGAGGCATTGACACATCTTCACTTAGTAGAGTATGTTGGA
GAACAGACTGCCCTACTAATAAAGATGGTTCCAGAAGATCAGCGCTTTGCAGCTGCCATTGTCCTGATAG
TGTGGGTCTCAGCCTTGGCATCATCCTTGATTGACAACATCCCATTTACTGCTACGATGATTCCTGTACT
CCTGAACCTGAGCCAAGACCCTGAAATTAGTTTGCCTGCACTGCCTCTCATGTATGCCCTGGCCCTCGGT
GCCTGCCTGGGAGGTAATGGGACACTTATCGGAGCATCCACAAATGTTGTTTGTGCAGGAATCGCAGAGA
AGCATGGGTATGGATTCTCTTTCATGGAATTTTTCAGGTTGGGCTTCCCTGTGATGCTCATGTCCTGCAC
CATTGGGATGTGCTATCTCCTGATTGCTCACATTGTGGTGGGATGGAATTAA

Translation (833 aa):
MRLENKDIRLASAVLEVELHQTSALSVPTCPDPGRLLTVKPATSNYKLGQADPCIPYAGEAAGKSVCVPE
HTEFGSFLVKGSSSLKDLSFKEDTPLLWNSSQKKRSQLMPVHHPEFIATEGSWENGLTAWEQKCMLGKEV
ADLSALASSEKRDLAGSVHLRAQVSKLGCCVRWIKITGLFVFVVLCSILFSLYPDQGKFWQLLAVSPLEN
YSVNLSGHADSMILQLDLAGALMAGGPSGSGKEEHVVVVVTQTDAAGNRRRRPQQLTYNWTVLLNPRSEH
VVVSRTFEIVSREAVSISIQASLQQTRLVPLLLAHQFLGASVEAQVASAVAILAGVYTLIIFEIVHRTLA
AMLGALAALAALAVVGDRPSLTHVVEWIDFETLALLFGMMILVAVFSETGFFDYCAVKAYQLSRGRVWAM
IFMLCLMAAILSAFLDNVTTMLLFTPVTIRLCEVLNLDPRQVLIAEVIFTNIGGAATAIGDPPNVIIVSN
QELRKMGLDFAGFTAHMFLGICLVLLVSFPLLRLLYWNKKLYNKEPSEIVELKHEIHVWRLTAQRISPAS
REETAVRGLLLEKVLALEHLLAQRLHTFHRQISQEDKNWETNIQELQRKHRISDRSLLVKCLTVLGFVIS
MFFLNSFVPGIHLDLGWIAILGAIWLLILADIHDFEIILHRVEWATLLFFAALFVLMEALTHLHLVEYVG
EQTALLIKMVPEDQRFAAAIVLIVWVSALASSLIDNIPFTATMIPVLLNLSQDPEISLPALPLMYALALG
ACLGGNGTLIGASTNVVCAGIAEKHGYGFSFMEFFRLGFPVMLMSCTIGMCYLLIAHIVVGWN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH