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Report for CCDS14611.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14611.1 Public Homo sapiens X ACTRT1 24 110 108 CCDS HistoryNCBI Gene:139741Re-query CCDS DB by CCDS ID:14611.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14611.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371124.5 ENSP00000360165.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371124.5Link to Ensembl Protein Viewer:ENSP00000360165.3Re-query CCDS DB by Nucleotide ID:ENST00000371124Re-query CCDS DB by Protein ID:ENSP00000360165
Original member Current member NCBI NM_138289.4 NP_612146.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138289.4Link to Protein Sequence:NP_612146.1Re-query CCDS DB by Nucleotide ID:NM_138289Re-query CCDS DB by Protein ID:NP_612146Link to BLAST:NP_612146.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612146.1 376 Q8TDG2 376 100% 0 0

Chromosomal Locations for CCDS 14611.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 128051076 128052206 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1131 nt):
ATGTTTAATCCACATGCATTAGATGTTCCTGCTGTAATTTTTGACAATGGTTCAGGACTCTGCAAAGCAG
GCCTGTCTGGAGAGATTGGACCCCGCCATGTCATCAGCTCCGTCTTGGGACATTGTAAATTCAATGTGCC
TTTAGCAAGACTTAATCAGAAGTACTTCGTGGGGCAAGAAGCCCTGTACAAGTATGAGGCCCTACATTTG
CACTACCCCATTGAGCGTGGACTGGTAACAGGATGGGATGACATGGAGAAACTCTGGAAACATCTCTTTG
AGCGGGAGCTTGGAGTAAAACCCAGCCAACAGCCTGTACTTATGACCGAGCCCTCTTTGAATCCTAGGGA
AATTCGAGAAAAGCTAGCAGAAATGATGTTTGAGACCTTCAGTGTGCCTGGTTTCTACCTGTCTAATCAT
GCGGTGGCAGCGCTCTATGCCTCTGCCTGTGTCACAGGCCTGGTGGTGGACAGTGGAGATGGGGTCACTT
GCACTGTCCCCATCTTTGAGGGTTACTCCCTGCCTCACGCAGTCACCAAACTCTGTATGGCAGGGAGGGA
CATCACAGAGCACCTCACCCGGCTCCTCTTTGCTAGCGGGTTTAACTTCCCTTGCATACTCAACAAGGCC
GTGGTAAATAACATCAAAGAGAAGTTGTGCTACATCGCCTTGGAGCCAGAGAAAGAGCTACGCAAGAGCC
GGGGAGAGGTCCTGGGAGCATACAGACTGCCAGATGGACATGTCATCCACTTTGGGGATGAGCTGTACCA
AGTGCCCGAGGTTCTTTTTGCACCTGACCAGCTGGGCATCCACAGCCCAGGACTCTCAAAAATGGTCTCC
AGCAGCATCATGAAGTGTGACACTGACATCCAGAATAAACTTTATGCAGACATTGTACTCTCCGGGGGCA
CCACTCTCCTCCCTGGGCTGGAGGAAAGGCTCATGAAGGAAGTGGAACAGCTGGCTTCCAAAGGTACTCC
CATCAAGATCACAGCTTCTCCTGATAGATGCTTCTCTGCATGGATTGGTGCATCCATCATGACCTCTATG
AGCAGTTTCAAGCAGATGTGGGTCACCTCGGCAGACTTCAAGGAGTATGGGACATCTGTGGTTCAAAGAA
GGTGCTTTTAA

Translation (376 aa):
MFNPHALDVPAVIFDNGSGLCKAGLSGEIGPRHVISSVLGHCKFNVPLARLNQKYFVGQEALYKYEALHL
HYPIERGLVTGWDDMEKLWKHLFERELGVKPSQQPVLMTEPSLNPREIREKLAEMMFETFSVPGFYLSNH
AVAALYASACVTGLVVDSGDGVTCTVPIFEGYSLPHAVTKLCMAGRDITEHLTRLLFASGFNFPCILNKA
VVNNIKEKLCYIALEPEKELRKSRGEVLGAYRLPDGHVIHFGDELYQVPEVLFAPDQLGIHSPGLSKMVS
SSIMKCDTDIQNKLYADIVLSGGTTLLPGLEERLMKEVEQLASKGTPIKITASPDRCFSAWIGASIMTSM
SSFKQMWVTSADFKEYGTSVVQRRCF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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