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Report for CCDS18528.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18528.1 Public Mus musculus 4 Dynlt4 23 108 98 CCDS HistoryNCBI Gene:242646Re-query CCDS DB by CCDS ID:18528.1Re-query CCDS DB by GeneID:242646See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 18528.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062206.2 ENSMUSP00000052243.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062206.2Link to Ensembl Protein Viewer:ENSMUSP00000052243.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000062206Re-query CCDS DB by Protein ID:ENSMUSP00000052243
Original member Current member NCBI NM_175030.2 NP_778195.1 Accepted alive Link to Nucleotide Sequence:NM_175030.2Link to Protein Sequence:NP_778195.1Re-query CCDS DB by Nucleotide ID:NM_175030Re-query CCDS DB by Protein ID:NP_778195Link to BLAST:NP_778195.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_778195.1 219 Q8CDY7 219 100% 0 0

Chromosomal Locations for CCDS 18528.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 117127982 117128641 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (660 nt):
ATGGCTTGCAGGACCCTGCCATCCAGACGCCAGGAAGAGGAGACTACCAAAGACCTGGCTCTGAAATTAC
CACCAGGGAAACCTGGAGGTCACCTGCCCAGCATTGATGAGACCCGACCTATAGGCCCAGGCCCAGCCTC
CCGTCGTGGCTCCCTGCCGGGCCTACACCCATCCTTTTCGCGCCGCAACTCACTGGCGGGACCCTTAGTG
GGTCCTGGAGGTCGACGACCATCCCTGGGCCCAGTGCCCCCTCTAGGTTCACGAGTTAGTTTTTCTGGGC
TGCCCCTGATGCTTCCCCGTAGGATGGCACCCTCATACCGCTTAGAACCGGCGCCTGGGGAACACTGGGA
AGCTGCAGGTGCCCAGCGGGCCCTGGAGGCAGCACTGACCACACAGCTGAACGGTGTGTGCTACTGCGGT
TCTGAGGCAGGGAAACTGGTGCAGGCACTATGTGAACAGATACACACCCGCGTGAGGGAGCTCAACCTAC
CCCGCTACAAACTCGTGTGCAACGTGGTGCTGGGGCCACGCGAGGGACAGGGTGTGCATGTGGTCAGCCG
AGCACTCTGGGATGCGGTGCACGATGGACTGGCCTCTGCCACCTTCACCAACCCTTCTCTGTTTGCTGTG
GCTACCGTCCACGCGGTCTACTGGGAATGA

Translation (219 aa):
MACRTLPSRRQEEETTKDLALKLPPGKPGGHLPSIDETRPIGPGPASRRGSLPGLHPSFSRRNSLAGPLV
GPGGRRPSLGPVPPLGSRVSFSGLPLMLPRRMAPSYRLEPAPGEHWEAAGAQRALEAALTTQLNGVCYCG
SEAGKLVQALCEQIHTRVRELNLPRYKLVCNVVLGPREGQGVHVVSRALWDAVHDGLASATFTNPSLFAV
ATVHAVYWE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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