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Report for CCDS24086.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
24086.1 Public Mus musculus 10 Fhl4 23 108 98 CCDS HistoryNCBI Gene:14202Re-query CCDS DB by CCDS ID:24086.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 24086.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000059383.7 ENSMUSP00000050054.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000059383.7Link to Ensembl Protein Viewer:ENSMUSP00000050054.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000059383Re-query CCDS DB by Protein ID:ENSMUSP00000050054
Original member Current member EBI ENSMUST00000216889.1 ENSMUSP00000150570.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000216889.1Link to Ensembl Protein Viewer:ENSMUSP00000150570.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000216889Re-query CCDS DB by Protein ID:ENSMUSP00000150570
Original member Current member NCBI NM_010214.4 NP_034344.2 Accepted alive Link to Nucleotide Sequence:NM_010214.4Link to Protein Sequence:NP_034344.2Re-query CCDS DB by Nucleotide ID:NM_010214Re-query CCDS DB by Protein ID:NP_034344Link to BLAST:NP_034344.2

Chromosomal Locations for CCDS 24086.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 85098076 85098915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (840 nt):
ATGTCTGAGTTCAAATGCCACCATTGCGAGGAATCCTTGCAAGGTAAAAAGTATGTGCAGAAGGATGGAG
CCAACTACTGTGTGACATGCTTTGACTCGCATTGTGCCAATATCTGTCAGGAATGCCACAAGCCCATAGG
TGCAGATTCCAAGGAGGTGTGTTATAAGGAGCAATTCTGGCACAACACCTGCTTCAAATGTTCCAAGTGT
TCTCAACTCTTGGCTACTGAGACCTTTGTTGCCTGGGACAAGAATATCCTGTGCAACAAGTGTGCCACTC
GAGTCACCTTCCCCAAGTGCAAAGGGTGCCTCAAAGATATTGAGGAAGGAGACCATAATGTGGAATACAA
AGGTAGTATCTGGCATAAAAACTGCTTTGTCTGCACCAACTGCAAGGACATCATTGGAACCAAAAATTTC
TTCCCTAAAGATGAGGGATTCTACTGTGTGACTTGTTATGATGCCTTGTTTACCAAGCATTGTATGAAAT
GCAAAAAGCCCATCACATCTGGAGGAGTCAGTTACCAGGATCAGCCCTGGCATAGTGAGTGCTTTGTATG
TGTTTCCTGCTCTAAGGAGCTGAGTGGACAGCGTTTCACTGCTATGGATGACCAGTATTTTTGTGTGGAT
TGCTACAAGAACTATATAGCCAAGAAGTGTGCTGGGTGCAAGAACCCCATCACTGGGTTTGGTAAAGGCG
CCAATGTGGTGGCCCATGAGCAGAATTCCTGGCATGACTACTGCTTCAACTGCAAAACCTGTTCTGTAAA
TCTAGCCAATAAGCACTTTGTGTTTCATGATGAGCAGGTGTACTGTCCTGACTGTGCCAGAAATCTATAA

Translation (279 aa):
MSEFKCHHCEESLQGKKYVQKDGANYCVTCFDSHCANICQECHKPIGADSKEVCYKEQFWHNTCFKCSKC
SQLLATETFVAWDKNILCNKCATRVTFPKCKGCLKDIEEGDHNVEYKGSIWHKNCFVCTNCKDIIGTKNF
FPKDEGFYCVTCYDALFTKHCMKCKKPITSGGVSYQDQPWHSECFVCVSCSKELSGQRFTAMDDQYFCVD
CYKNYIAKKCAGCKNPITGFGKGANVVAHEQNSWHDYCFNCKTCSVNLANKHFVFHDEQVYCPDCARNL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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