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Report for CCDS15426.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15426.1 Public Mus musculus 1 Fmo3 23 108 98 CCDS HistoryNCBI Gene:14262Re-query CCDS DB by CCDS ID:15426.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15426.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000028010.8 ENSMUSP00000028010.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000028010.8Link to Ensembl Protein Viewer:ENSMUSP00000028010.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000028010Re-query CCDS DB by Protein ID:ENSMUSP00000028010
Original member Current member NCBI NM_008030.2 NP_032056.1 Accepted alive Link to Nucleotide Sequence:NM_008030.2Link to Protein Sequence:NP_032056.1Re-query CCDS DB by Nucleotide ID:NM_008030Re-query CCDS DB by Protein ID:NP_032056Link to BLAST:NP_032056.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032056.1 534 P97501 534 100% 0 0

Chromosomal Locations for CCDS 15426.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 162954178 162954526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162955191 162955263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162958237 162958592 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162963880 162964079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162966873 162967015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162967781 162967943 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162968681 162968869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 162982988 162983119 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1605 nt):
ATGAAGAAGAAAGTGGCCATCATTGGAGCTGGTGTCAGTGGCCTGGCTGCCATCAGGAGCTGTCTGGAGG
AGGGGCTGGAGCCCACATGCTTTGAGAGGAGTGATGATGTTGGGGGCCTGTGGAAATTCTCAGACCATAT
AGAAGAGGGCAGGGCCAGCATTTACCAATCGGTCTTCACCAACTCTTCCAAAGAGATGATGTGTTTTCCA
GACTTCCCCTATCCCGATGACTTTCCCAACTTCATGCATCACAGCAAGCTCCAAGAATACATCACTTCAT
TTGCCAAGGAAAAGAACCTCCTGAAATACATACAGTTTGAGACACCTGTAACCAGTATAAATAAATGTCC
TAATTTCTCAACTACTGGCAAATGGGAAGTCACCACTGAAAAGCACGGTAAAAAAGAAACAGCTGTCTTT
GATGCTACAATGATTTGTTCTGGGCATCACATATTTCCCCATGTACCAAAAGACTCCTTTCCAGGACTGA
ACCGTTTTAAAGGCAAATGCTTCCACAGCAGGGACTATAAGGAACCAGGAATATGGAAGGGAAAACGAGT
CCTGGTGATTGGCCTGGGGAACTCAGGCTGTGACATTGCTGCAGAACTCAGCCATGTAGCTCAGAAGGTC
ACCATCAGCTCTAGAAGTGGTTCTTGGGTGATGAGTCGAGTCTGGGACGATGGCTACCCTTGGGACATGG
TGGTGCTCACACGGTTTCAAACTTTCCTCAAAAACAACTTACCCACCGCCATCTCTGACTGGTGGTACAC
AAGGCAGATGAATGCCAGATTCAAGCACGAAAACTATGGTTTGGTGCCTTTAAACAGAACACTCAGGAAA
GAGCCCGTGTTCAATGATGAGCTCCCAGCCCGCATCCTGTGTGGCATGGTGACCATCAAGCCTAATGTAA
AGGAGTTCACAGAGACGTCCGCTGTGTTTGAGGATGGGACCATGTTTGAGGCCATTGACTGTGTCATCTT
TGCCACAGGCTATGGTTATGCCTACCCCTTCCTGGATGACTCTATTATCAAAAGCAGAAATAATGAGGTC
ACTTTGTACAAAGGTGTCTTCCCTCCTCAACTAGAGAAACCAACCATGGCAGTGATTGGCCTGGTCCAGT
CCCTGGGTGCCACCATCCCCATAACTGACCTGCAGGCACGCTGGGCAGCACAAGTAATAAAAGGAACTTG
CACTTTGCCTTCTGTAAACGACATGATGGATGACATTGATGAGAAAATGGGGGAAAAGTTCAAATGGTAT
GGCAATAGCACCACCATCCAGACAGATTACATTGTTTATATGGATGAACTGGCCTCCTTCATTGGTGCAA
AGCCCAATCTCCTATGGCTGTTTCTCAAGGATCCCAGGTTGGCTGTAGAAGTGTTCTTTGGCCCTTGCAG
CCCCTACCAGTTCCGGCTGGTAGGCCCAGGAAAGTGGTCAGGAGCCCGGAACGCCATCCTAACACAGTGG
GACCGATCACTGAAGCCTATGAAGACGCGTGTCGTCAGTAAAGTTCAGAAGTCTTGCTCTCACTTCTATT
CCCGTTTGCTCAGGCTCCTGGCTGTTCCCGTTCTGCTCATTGCTTTGTTCCTTGTGTTGATCTGA

Translation (534 aa):
MKKKVAIIGAGVSGLAAIRSCLEEGLEPTCFERSDDVGGLWKFSDHIEEGRASIYQSVFTNSSKEMMCFP
DFPYPDDFPNFMHHSKLQEYITSFAKEKNLLKYIQFETPVTSINKCPNFSTTGKWEVTTEKHGKKETAVF
DATMICSGHHIFPHVPKDSFPGLNRFKGKCFHSRDYKEPGIWKGKRVLVIGLGNSGCDIAAELSHVAQKV
TISSRSGSWVMSRVWDDGYPWDMVVLTRFQTFLKNNLPTAISDWWYTRQMNARFKHENYGLVPLNRTLRK
EPVFNDELPARILCGMVTIKPNVKEFTETSAVFEDGTMFEAIDCVIFATGYGYAYPFLDDSIIKSRNNEV
TLYKGVFPPQLEKPTMAVIGLVQSLGATIPITDLQARWAAQVIKGTCTLPSVNDMMDDIDEKMGEKFKWY
GNSTTIQTDYIVYMDELASFIGAKPNLLWLFLKDPRLAVEVFFGPCSPYQFRLVGPGKWSGARNAILTQW
DRSLKPMKTRVVSKVQKSCSHFYSRLLRLLAVPVLLIALFLVLI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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