NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS8733.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8733.1 Public Homo sapiens 12 CPNE8 24 110 108 CCDS HistoryNCBI Gene:144402Re-query CCDS DB by CCDS ID:8733.1See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8733.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000331366.10 ENSP00000329748.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000331366.10Link to Ensembl Protein Viewer:ENSP00000329748.5Re-query CCDS DB by Nucleotide ID:ENST00000331366Re-query CCDS DB by Protein ID:ENSP00000329748
Original member Current member NCBI NM_153634.3 NP_705898.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153634.3Link to Protein Sequence:NP_705898.1Re-query CCDS DB by Nucleotide ID:NM_153634Re-query CCDS DB by Protein ID:NP_705898Link to BLAST:NP_705898.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_705898.1 564 Q86YQ8-1 564 100% 0 0

Chromosomal Locations for CCDS 8733.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 38653882 38654070 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38670729 38670802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38675717 38675774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38677452 38677554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38685490 38685617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38693657 38693838 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38702875 38702921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38723772 38723833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38724846 38724899 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38730283 38730358 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38760847 38760888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38762112 38762216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38767635 38767738 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38776238 38776301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38829379 38829455 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38839916 38839955 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38848559 38848662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38873004 38873050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38874471 38874511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 38905437 38905534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1695 nt):
ATGGACAGCCGCTACAACAGCACTGCGGGCATCGGGGACTTGAACCAGCTGAGCGCTGCCATCCCGGCCA
CGCGGGTGGAGGTGTCCGTGTCCTGCAGAAATCTTCTTGACAGAGACACATTTTCTAAATCTGATCCAAT
TTGTGTCTTATATGTACAAGGAGTTGGAAATAAAGAATGGAGAGAGTTTGGAAGAACTGAAGTAATTGAT
AATACTTTAAATCCTGATTTTGTAAGAAAGTTTATTCTGGACTACTTTTTTGAAGAAAGAGAGAATCTTC
GTTTTGACTTGTATGATGTTGATTCAAAGAGCCCCAACTTATCCAAACATGACTTTCTGGGACAAGTGTT
TTGTACATTGGGAGAGATCGTTGGTTCACAGGGAAGTCGCCTGGAAAAACCAATAGTAGGAATTCCAGGG
AAGAAATGTGGTACAATCATACTTACAGCAGAGGAATTAAACTGTTGCAGGGATGCCGTTTTGATGCAAT
TTTGTGCGAACAAATTGGACAAGAAGGACTTCTTTGGAAAATCAGATCCTTTCCTTGTATTTTATCGAAG
TAATGAAGATGGCAGTTTTACAATTTGTCACAAGACAGAAGTTGTCAAAAACACTCTAAATCCAGTATGG
CAAGCATTCAAGATCTCAGTCAGAGCATTATGTAATGGAGACTATGACAGAACAATCAAAGTAGAGGTGT
ATGACTGGGACCGAGATGGAAGTCATGATTTCATTGGAGAATTTACAACAAGCTATAGGGAACTTTCTAG
AGGGCAGTCACAATTCAACGTATATGAGGTGGTGAATCCCAAAAAGAAAGGAAAAAAGAAAAAATATACT
AATTCTGGAACAGTAACTTTACTCTCTTTCTTGGTAGAAACAGAAGTTTCATTCCTTGACTACATTAAGG
GAGGGACGCAAATCAATTTCACAGTGGCTATTGATTTTACAGCATCAAACGGCAACCCTGCTCAGCCCAC
TTCCCTCCACTACATGAATCCTTACCAACTGAATGCCTATGGTATGGCACTAAAAGCAGTGGGAGAAATT
GTTCAAGATTATGACAGTGATAAAATGTTTCCAGCTCTAGGATTTGGTGCAAAACTGCCTCCAGATGGAA
GGATATCTCACGAATTTGCTTTGAATGGGAATCCTCAAAACCCCTACTGTGATGGCATTGAGGGGGTCAT
GGAGGCTTATTACAGGAGTCTGAAATCTGTACAACTATATGGGCCCACCAACTTTGCTCCTGTAATTAAT
CATGTAGCAAGATATGCTTCTTCTGTAAAGGATGGCTCCCAGTATTTTGTGCTTCTGATTGTTACAGATG
GTGTTATCTCAGATATGGCCCAGACTAAGGAGTCCATAGTTAATGCCTCAAAACTTCCAATGTCAATAAT
TATAGTAGGTGTTGGACCAGCAGAATTTGATGCAATGGTCGAATTGGATGGAGATGATGTAAGAGTCTCC
TCTAGAGGAAAATATGCTGAAAGAGACATTGTGCAGTTTGTGCCATTCAGGGATTATATTGACAGAAGTG
GAAACCACATACTGAGCATGGCTAGATTGGCTAAAGATGTCCTAGCTGAGATCCCTGAGCAGTTTCTCTC
CTATATGAGAGCCCGAGGAATCAAGCCATCACCTGCGCCTCCCCCATACACCCCACCTACACATGTGTTA
CAGACTCAAATATGA

Translation (564 aa):
MDSRYNSTAGIGDLNQLSAAIPATRVEVSVSCRNLLDRDTFSKSDPICVLYVQGVGNKEWREFGRTEVID
NTLNPDFVRKFILDYFFEERENLRFDLYDVDSKSPNLSKHDFLGQVFCTLGEIVGSQGSRLEKPIVGIPG
KKCGTIILTAEELNCCRDAVLMQFCANKLDKKDFFGKSDPFLVFYRSNEDGSFTICHKTEVVKNTLNPVW
QAFKISVRALCNGDYDRTIKVEVYDWDRDGSHDFIGEFTTSYRELSRGQSQFNVYEVVNPKKKGKKKKYT
NSGTVTLLSFLVETEVSFLDYIKGGTQINFTVAIDFTASNGNPAQPTSLHYMNPYQLNAYGMALKAVGEI
VQDYDSDKMFPALGFGAKLPPDGRISHEFALNGNPQNPYCDGIEGVMEAYYRSLKSVQLYGPTNFAPVIN
HVARYASSVKDGSQYFVLLIVTDGVISDMAQTKESIVNASKLPMSIIIVGVGPAEFDAMVELDGDDVRVS
SRGKYAERDIVQFVPFRDYIDRSGNHILSMARLAKDVLAEIPEQFLSYMRARGIKPSPAPPPYTPPTHVL
QTQI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH