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Report for CCDS12355.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12355.1 Public Homo sapiens 19 ABHD8 24 110 108 CCDS HistoryNCBI Gene:79575Re-query CCDS DB by CCDS ID:12355.1Re-query CCDS DB by GeneID:79575See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12355.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247706.4 ENSP00000247706.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000247706.4Link to Ensembl Protein Viewer:ENSP00000247706.2Re-query CCDS DB by Nucleotide ID:ENST00000247706Re-query CCDS DB by Protein ID:ENSP00000247706
Original member Current member NCBI NM_024527.5 NP_078803.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024527.5Link to Protein Sequence:NP_078803.4Re-query CCDS DB by Nucleotide ID:NM_024527Re-query CCDS DB by Protein ID:NP_078803Link to BLAST:NP_078803.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078803.4 439 Q96I13 439 100% 0 0

Chromosomal Locations for CCDS 12355.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17292661 17292831 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17294288 17294504 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17294675 17294845 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17300856 17301616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1320 nt):
ATGCTGACCGGGGTGACCGACGGTATCTTCTGTTGCCTGCTGGGCACGCCCCCCAACGCCGTGGGGCCAC
TGGAGAGCGTCGAGTCCAGCGATGGCTACACCTTTGTAGAGGTCAAGCCCGGCCGCGTGCTGCGGGTGAA
GCATGCAGGACCCGCCCCAGCCGCTGCCCCACCTCCACCATCATCCGCATCCTCGGATGCAGCCCAGGGG
GACCTCTCCGGCTTGGTCCGCTGTCAGCGCCGGATCACCGTGTACCGCAATGGGCGGTTGCTGGTGGAAA
ACCTGGGCCGAGCCCCTCGAGCCGACCTCCTACACGGGCAGAATGGCTCTGGGGAGCCGCCGGCCGCCCT
GGAGGTGGAGCTGGCAGATCCGGCGGGCAGCGATGGCCGCTTGGCCCCCGGCAGCGCAGGCAGCGGCAGC
GGCAGTGGCAGTGGTGGGCGGCGGCGGCGAGCCAGGCGCCCCAAGAGGACCATCCATATTGACTGTGAGA
AGCGCATCACTAGCTGCAAAGGCGCCCAGGCCGACGTGGTGCTCTTTTTCATCCATGGTGTCGGCGGTTC
CCTGGCCATCTGGAAGGAGCAGCTGGACTTCTTTGTGCGCCTAGGCTATGAGGTGGTGGCTCCTGACCTG
GCCGGCCACGGGGCCAGCTCTGCGCCCCAGGTGGCCGCAGCCTACACCTTCTATGCGCTGGCTGAGGACA
TGCGAGCAATCTTCAAGCGCTATGCCAAGAAGCGAAATGTGCTCATTGGCCATTCCTACGGTGTCTCTTT
CTGCACATTCCTGGCACATGAGTACCCAGACCTAGTGCACAAGGTGATCATGATCAATGGCGGGGGCCCT
ACGGCGCTGGAGCCCAGCTTCTGCTCAATCTTCAACATGCCCACCTGCGTCCTGCACTGCTTGTCGCCCT
GCCTGGCCTGGAGCTTCCTCAAGGCCGGCTTCGCCCGCCAAGGAGCCAAGGAGAAGCAGCTGTTAAAGGA
GGGCAACGCTTTCAACGTGTCATCCTTCGTACTCCGGGCCATGATGAGCGGCCAGTACTGGCCCGAGGGC
GACGAGGTCTACCACGCCGAGCTCACCGTGCCCGTCCTGCTTGTCCACGGCATGCACGATAAGTTTGTGC
CGGTGGAGGAAGACCAGCGCATGGCCGAGATCCTGCTCCTGGCATTCCTGAAGCTCATCGACGAGGGCAG
CCACATGGTGATGCTGGAATGCCCTGAGACGGTCAACACGCTGCTCCACGAATTCCTGCTCTGGGAGCCC
GAGCCCTCGCCCAAGGCTCTACCGGAGCCACTGCCGGCGCCTCCAGAAGACAAGAAGTAG

Translation (439 aa):
MLTGVTDGIFCCLLGTPPNAVGPLESVESSDGYTFVEVKPGRVLRVKHAGPAPAAAPPPPSSASSDAAQG
DLSGLVRCQRRITVYRNGRLLVENLGRAPRADLLHGQNGSGEPPAALEVELADPAGSDGRLAPGSAGSGS
GSGSGGRRRRARRPKRTIHIDCEKRITSCKGAQADVVLFFIHGVGGSLAIWKEQLDFFVRLGYEVVAPDL
AGHGASSAPQVAAAYTFYALAEDMRAIFKRYAKKRNVLIGHSYGVSFCTFLAHEYPDLVHKVIMINGGGP
TALEPSFCSIFNMPTCVLHCLSPCLAWSFLKAGFARQGAKEKQLLKEGNAFNVSSFVLRAMMSGQYWPEG
DEVYHAELTVPVLLVHGMHDKFVPVEEDQRMAEILLLAFLKLIDEGSHMVMLECPETVNTLLHEFLLWEP
EPSPKALPEPLPAPPEDKK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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