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Report for CCDS15859.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15859.1 Public Mus musculus 2 Urm1 23 108 98 CCDS HistoryNCBI Gene:68205Re-query CCDS DB by CCDS ID:15859.1Re-query CCDS DB by GeneID:68205See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 15859.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091142.3 ENSMUSP00000088676.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091142.3Link to Ensembl Protein Viewer:ENSMUSP00000088676.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000091142Re-query CCDS DB by Protein ID:ENSMUSP00000088676
Original member Current member NCBI NM_026615.4 NP_080891.1 Accepted alive Link to Nucleotide Sequence:NM_026615.4Link to Protein Sequence:NP_080891.1Re-query CCDS DB by Nucleotide ID:NM_026615Re-query CCDS DB by Protein ID:NP_080891Link to BLAST:NP_080891.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080891.1 101 Q9D2P4 101 100% 0 0

Chromosomal Locations for CCDS 15859.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 29827401 29827435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29832692 29832762 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29841402 29841483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29842721 29842769 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 29843103 29843171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (306 nt):
ATGGCGGCGCCCTTATGTGTGAAGGTGGAGTTCGGAGGTGGTGCAGAGCTCCTGTTTGATGGGGTAAAAA
AGCATCAAGTCGCCTTGCCTGGGCAGGAGGAACCCTGGGATATACGGAACCTCCTTGTCTGGATCAAGAA
GAATTTGCTAAAAGAGCGACCAGAGCTGTTCATCCAGGGAGACAGTGTGCGGCCAGGAATCCTGGTGCTG
ATTAATGATGCCGACTGGGAACTGCTGGGGGAGCTGGACTACCAGCTGCAGGACCAAGACAGCATCCTCT
TCATCTCCACACTGCACGGCGGCTGA

Translation (101 aa):
MAAPLCVKVEFGGGAELLFDGVKKHQVALPGQEEPWDIRNLLVWIKKNLLKERPELFIQGDSVRPGILVL
INDADWELLGELDYQLQDQDSILFISTLHGG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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