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Report for CCDS93632.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93632.1 Public Homo sapiens 4 ABHD18 24 110 108 CCDS HistoryNCBI Gene:80167Re-query CCDS DB by CCDS ID:93632.1Re-query CCDS DB by GeneID:80167See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 93632.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000611882.1 ENSP00000480015.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611882.1Link to Ensembl Protein Viewer:ENSP00000480015.1Re-query CCDS DB by Nucleotide ID:ENST00000611882Re-query CCDS DB by Protein ID:ENSP00000480015
Original member Current member NCBI NM_001366044.1 NP_001352973.1 Accepted alive Link to Nucleotide Sequence:NM_001366044.1Link to Protein Sequence:NP_001352973.1Re-query CCDS DB by Nucleotide ID:NM_001366044Re-query CCDS DB by Protein ID:NP_001352973Link to BLAST:NP_001352973.1
Original member Current member NCBI NM_001366045.1 NP_001352974.1 Accepted alive Link to Nucleotide Sequence:NM_001366045.1Link to Protein Sequence:NP_001352974.1Re-query CCDS DB by Nucleotide ID:NM_001366045Re-query CCDS DB by Protein ID:NP_001352974Link to BLAST:NP_001352974.1
Original member Current member NCBI NM_001366047.1 NP_001352976.1 Accepted alive Link to Nucleotide Sequence:NM_001366047.1Link to Protein Sequence:NP_001352976.1Re-query CCDS DB by Nucleotide ID:NM_001366047Re-query CCDS DB by Protein ID:NP_001352976Link to BLAST:NP_001352976.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001352973.1 321 Q0P651-3 321 100% 0 0
NP_001352974.1 321 Q0P651-3 321 100% 0 0
NP_001352976.1 321 Q0P651-3 321 100% 0 0

Chromosomal Locations for CCDS 93632.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 128009131 128009191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128011673 128011700 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128017363 128017501 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128020080 128020169 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128021137 128021238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128028475 128028853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 128030510 128030676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (966 nt):
ATGGCCCGTCCTATGATTAAAGAAGCCCGAATGGCTTCTTTATTGTTAGAAAACCCTTATTATGGCTGCA
GGAAACCCAAGGACCAAGTAAGGTCCAGCTTAAAAAATGTGTCCGACCTTTTTGTGATGGGAGGAGCTCT
TGTTTTAGAATCTGCAGCTCTCTTGCACTGGCTAGAGAGGGAAGGTTACGGCCCTTTAGGAATGACTGGA
ATATCCATGGGAGGACACATGGCTTCCTTAGCGGTATCCAACTGGCCTAAGCCCATGCCATTGATTCCAT
GCCTGTCTTGGTCCACAGCATCTGGGGTCTTCACTACGGGTGTGTTGAGTAAATCAATTAATTGGAGGGA
GCTGGAAAAGCAATATTATACCCAGACAGTTTATGAAGAAGAAATTATTCACATGCTTGAATACTGTGGA
ACAGATTCTTTCAAAATGGGACAAGAGTTTGTGAAACACTTCACTAGCAGTGCAGACAAGCTAACTAACC
TTAATCTGGTTTCCAGAACTTTAAATTTAGATATATCAAACCAAGTTGTATCCCAAAAACCTGCTGACTG
CCATAATTCTAGCAAAACATCTGTCAGTGCGACATCAGAAGGACTCTTATTGCAAGATACCTCTAAGATG
AAGCGCTTCAATCAAACACTTTCAACCAACAAAAGTGGTTATACAAGTCGCAACCCTCAGTCATACCACC
TACTTAGTAAAGAACAAAGCAGAAACAGTCTTCGGAAAGAGTCTTTAATATTTATGAAAGGAGTCATGGA
TGAATGTACTCATGTAGCAAATTTCTCAGTCCCAGTTGATCCAAGCCTCATTATAGTGGTTCAAGCCAAA
GAAGATGCCTATATTCCACGAACAGGAGTTCGAAGTTTACAAGAAATTTGGCCTGGTTGTGAAATCCGAT
ACTTAGAAGGGGGTCATATTAGTGCTTATCTTTTTAAACAAGGACTCTTCAGGTAA

Translation (321 aa):
MARPMIKEARMASLLLENPYYGCRKPKDQVRSSLKNVSDLFVMGGALVLESAALLHWLEREGYGPLGMTG
ISMGGHMASLAVSNWPKPMPLIPCLSWSTASGVFTTGVLSKSINWRELEKQYYTQTVYEEEIIHMLEYCG
TDSFKMGQEFVKHFTSSADKLTNLNLVSRTLNLDISNQVVSQKPADCHNSSKTSVSATSEGLLLQDTSKM
KRFNQTLSTNKSGYTSRNPQSYHLLSKEQSRNSLRKESLIFMKGVMDECTHVANFSVPVDPSLIIVVQAK
EDAYIPRTGVRSLQEIWPGCEIRYLEGGHISAYLFKQGLFR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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