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Report for CCDS23014.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23014.1 Public Mus musculus 9 Or8b44 23 108 98 CCDS HistoryNCBI Gene:258801Re-query CCDS DB by CCDS ID:23014.1Re-query CCDS DB by GeneID:258801See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23014.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000052901.1 ENSMUSP00000051531.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000052901.1Link to Ensembl Protein Viewer:ENSMUSP00000051531.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000052901Re-query CCDS DB by Protein ID:ENSMUSP00000051531
Original member Current member EBI ENSMUST00000214264.2 ENSMUSP00000148894.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214264.2Link to Ensembl Protein Viewer:ENSMUSP00000148894.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214264Re-query CCDS DB by Protein ID:ENSMUSP00000148894
Original member Current member EBI ENSMUST00000214003.2 ENSMUSP00000149897.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000214003.2Link to Ensembl Protein Viewer:ENSMUSP00000149897.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000214003Re-query CCDS DB by Protein ID:ENSMUSP00000149897
Original member Current member NCBI NM_146805.2 NP_667016.2 Accepted alive Link to Nucleotide Sequence:NM_146805.2Link to Protein Sequence:NP_667016.2Re-query CCDS DB by Nucleotide ID:NM_146805Re-query CCDS DB by Protein ID:NP_667016Link to BLAST:NP_667016.2

Chromosomal Locations for CCDS 23014.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 38498671 38499603 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (933 nt):
ATGGCCCTGGAAAATGCTTCCTTGGTCACTGAGTTCATCTTGATGGGGTTAACAAACAGACCTGACCTAC
AAATACCCCTGTTCCTACTCTTTCTGGTGATGTACGTGATAGCTACATTGGGGAATTTAGCTTTGATCAT
GCTGATTATTCTGAATTCTCACCTTCACACTCCTATGTATTTTTTCCTCCTTAACTTGTCCTGCATAGAC
CTTTTTTATTGTTCAGTCATTACACCTAAAATGCTGATGAACTTTGTACTAAAGAAAAATGTTATTTCTT
ATGAGGGATGCATGGCCCAGTTCTATTTCTTTGCCTTTTTTGCAATTTCTGAATGTTATGTGCTGACAAC
AATGGCCTATGATCGCTATGTGGCCATTTGCAATCCACTCTTGTACAACATTGTAATGTCTCCTAAGTTG
TGTTCTTATCTTATGATGGGTACATATTTGATGGGGTTTTCTGGTGCCATGATCCATACTGGATGTATCC
TAAGACTGACATTCTGTGATAAAAACACCATCAATCACTATTTCTGTGACATCCTCCCTTTGCTCCAGAT
CTCCTGCACCAGTACCTATGTTAATGAGATAGAGTTGTTCATTGTAGCAGGAAAGGATATTATTGTTCCC
ACTGTAATCATCTTTACCTCTTACGGCTTTATCCTCTCCAGCATCCTCAAAATAAGCTCCACAGCAGGAA
TGTCCAAAGCCTTCAGCACATGTAGCTCTCACATAATCGCTCTTTGTCTGTTCTTTGGATCATGTACATT
TATGTATCTAAAACCCTCCTCAGTTGAGTCTATGGACCAGGGGAAAATATCTTCTGTCTTTTATAACATT
GTTGTCCCCCTGATGAATCCATTAATCTATAGCCTTAGGAACAAAGATGTTAAAATTGCTATAAAAAAAA
CTATAACCAAAGGAAAGTTTTAA

Translation (310 aa):
MALENASLVTEFILMGLTNRPDLQIPLFLLFLVMYVIATLGNLALIMLIILNSHLHTPMYFFLLNLSCID
LFYCSVITPKMLMNFVLKKNVISYEGCMAQFYFFAFFAISECYVLTTMAYDRYVAICNPLLYNIVMSPKL
CSYLMMGTYLMGFSGAMIHTGCILRLTFCDKNTINHYFCDILPLLQISCTSTYVNEIELFIVAGKDIIVP
TVIIFTSYGFILSSILKISSTAGMSKAFSTCSSHIIALCLFFGSCTFMYLKPSSVESMDQGKISSVFYNI
VVPLMNPLIYSLRNKDVKIAIKKTITKGKF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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