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Report for CCDS41064.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41064.1 Public Mus musculus X Gspt2 23 108 98 CCDS HistoryNCBI Gene:14853Re-query CCDS DB by CCDS ID:41064.1See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41064.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000096368.3 ENSMUSP00000109523.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000096368.3Link to Ensembl Protein Viewer:ENSMUSP00000109523.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000096368Re-query CCDS DB by Protein ID:ENSMUSP00000109523
Original member Current member NCBI NM_008179.2 NP_032205.2 Accepted alive Link to Nucleotide Sequence:NM_008179.2Link to Protein Sequence:NP_032205.2Re-query CCDS DB by Nucleotide ID:NM_008179Re-query CCDS DB by Protein ID:NP_032205Link to BLAST:NP_032205.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032205.2 632 Q149F3 632 100% 0 0

Chromosomal Locations for CCDS 41064.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 94636257 94638155 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1899 nt):
ATGGATCTCGGCAGCAGCAGCGACTCGGCTCCCGACTGCTGGGATCAGGTGGACATGGAAGCCCCGGGTT
CGGCTCCGAGCGGGGATGGAATCGCCCCCGCAGCCATGGCAGCGGCTGAGGCCGCGGAAGCCGAGGCCCA
GCGCAAGCATCTCAGCTTGGCCTTCAGCAGTCAGCTCAACATCCACGCCAAACCTTTCGTGCCTAGCGTA
AGCGCAGCGGAGTTCGTGCCGTCCTTCCTGCCTGGATCGGCCCAGCCGCCCGCCCCCACAGCCTCCAGCT
GCGACGAAACCTGCATCGGTGGCGCCGGGGAGCCTGAAGGTAAACGGATGGAATGGGGAGCACCTGTAGA
ACCTTCCAAAGATGGCCCTTTAGTGTCGTGGGAGGGTTCCAGTTCAGTTGTTACCATGGAACTTTCAGAA
CCTGTTGTAGAAAATGGAGAGGTGGAGATGGCCCTAGAAGAATCTTGGGAGCTTAAAGAAGTGAGTGAAG
CAAAGCCTGAGGCTTCTTTGGGAGATGCAGGGCCCCCAGAAGAAAGTGTCAAGGAAGTGATGGAGGAGAA
AGAGGAAGTAAGGAAATCAAAATCTGTGTCCATACCATCAGGTGCACCTAAGAAAGAACACGTAAATGTG
GTCTTCATTGGGCATGTGGATGCTGGCAAGTCAACCATTGGAGGACAAATAATGTTTTTGACAGGAATGG
TTGACAGAAGGACACTTGAGAAATACGAACGAGAAGCTAAGGAGAAGAATAGAGAGACCTGGTACTTGTC
CTGGGCCTTAGATACAAACCAGGAAGAACGAGACAAGGGTAAAACAGTGGAAGTGGGCCGTGCGTATTTT
GAAACGGAAAAGAAGCATTTCACAATCCTAGATGCCCCTGGCCACAAGAGTTTTGTCCCAAATATGATTG
GCGGTGCCTCTCAAGCCGATTTAGCTGTGCTGGTGATCTCTGCCAGGAAAGGGGAATTTGAGACTGGATT
TGAAAAAGGTGGACAGACAAGAGAACATGCAATGCTGGCCAAAACAGCAGGGGTAAAATACTTAATAGTG
CTTATTAATAAGATGGATGACCCCACAGTAGATTGGAGCAGTGAGCGATATGAAGAATGTAAAGAAAAAC
TGGTGCCCTTTTTGAAAAAAGTTGGTTTCAGTCCAAAAAAGGACATTCACTTTATGCCCTGCTCAGGACT
GACTGGAGCAAATATTAAAGAGCAATCTGATTTCTGTCCTTGGTACACCGGATTACCATTTATTCCGTAT
TTGGATAGTTTGCCAAACTTCAACAGATCAATTGATGGGCCAATTAGGTTGCCAATTGTGGATAAGTACA
AGGATATGGGCACTGTGGTCCTGGGTAAGCTGGAATCAGGATCCATTTTTAAAGGCCAGCAGCTTGTGAT
GATGCCAAACAAGCACAGTGTGGAAGTTCTAGGAATCGTTTCTGATGATGCCGAGACTGATTTTGTAGCT
CCAGGTGAAAACCTCAAAATCAGACTGAAAGGGATTGAAGAGGAAGAGATTCTTCCAGGCTTCATACTTT
GTGAACCCAGTAATCTTTGCCATTCCGGACGCACATTTGATGTTCAGATAGTGATCATTGAGCACAAGTC
TATCATCTGCCCAGGTTATAATGCGGTGCTTCACATTCATACTTGTATTGAGGAGGTTGAAATAACAGCC
TTGATCTCCTTAGTAGACAAAAAGTCAGGAGAAAAAAGCAAGACACGGCCCCGCTTTGTGAAGCAAGACC
AAGTGTGCATTGCCCGGTTAAGGACAGCAGGAACTATCTGCCTGGAGACATTTAAAGATTTTCCTCAGAT
GGGTCGTTTTACTTTAAGAGATGAGGGTAAAACAATCGCCATTGGAAAAGTTCTGAAGCTGGTCCCAGAG
AAGGACTAA

Translation (632 aa):
MDLGSSSDSAPDCWDQVDMEAPGSAPSGDGIAPAAMAAAEAAEAEAQRKHLSLAFSSQLNIHAKPFVPSV
SAAEFVPSFLPGSAQPPAPTASSCDETCIGGAGEPEGKRMEWGAPVEPSKDGPLVSWEGSSSVVTMELSE
PVVENGEVEMALEESWELKEVSEAKPEASLGDAGPPEESVKEVMEEKEEVRKSKSVSIPSGAPKKEHVNV
VFIGHVDAGKSTIGGQIMFLTGMVDRRTLEKYEREAKEKNRETWYLSWALDTNQEERDKGKTVEVGRAYF
ETEKKHFTILDAPGHKSFVPNMIGGASQADLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKYLIV
LINKMDDPTVDWSSERYEECKEKLVPFLKKVGFSPKKDIHFMPCSGLTGANIKEQSDFCPWYTGLPFIPY
LDSLPNFNRSIDGPIRLPIVDKYKDMGTVVLGKLESGSIFKGQQLVMMPNKHSVEVLGIVSDDAETDFVA
PGENLKIRLKGIEEEEILPGFILCEPSNLCHSGRTFDVQIVIIEHKSIICPGYNAVLHIHTCIEEVEITA
LISLVDKKSGEKSKTRPRFVKQDQVCIARLRTAGTICLETFKDFPQMGRFTLRDEGKTIAIGKVLKLVPE
KD


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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