NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS12784.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12784.1 Public Homo sapiens 19 AKT1S1 24 110 108 CCDS HistoryNCBI Gene:84335Re-query CCDS DB by CCDS ID:12784.1Re-query CCDS DB by GeneID:84335See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12784.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000344175.10 ENSP00000341698.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000344175.10Link to Ensembl Protein Viewer:ENSP00000341698.5Re-query CCDS DB by Nucleotide ID:ENST00000344175Re-query CCDS DB by Protein ID:ENSP00000341698
Original member Current member EBI ENST00000391831.5 ENSP00000375707.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391831.5Link to Ensembl Protein Viewer:ENSP00000375707.1Re-query CCDS DB by Nucleotide ID:ENST00000391831Re-query CCDS DB by Protein ID:ENSP00000375707
Original member Current member EBI ENST00000391832.7 ENSP00000375708.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391832.7Link to Ensembl Protein Viewer:ENSP00000375708.3Re-query CCDS DB by Nucleotide ID:ENST00000391832Re-query CCDS DB by Protein ID:ENSP00000375708
Original member Current member EBI ENST00000391833.5 ENSP00000375709.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391833.5Link to Ensembl Protein Viewer:ENSP00000375709.1Re-query CCDS DB by Nucleotide ID:ENST00000391833Re-query CCDS DB by Protein ID:ENSP00000375709
Original member Current member EBI ENST00000391834.6 ENSP00000375710.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391834.6Link to Ensembl Protein Viewer:ENSP00000375710.2Re-query CCDS DB by Nucleotide ID:ENST00000391834Re-query CCDS DB by Protein ID:ENSP00000375710
Original member Current member NCBI NM_001098632.2 NP_001092102.1 Accepted alive Link to Nucleotide Sequence:NM_001098632.2Link to Protein Sequence:NP_001092102.1Re-query CCDS DB by Nucleotide ID:NM_001098632Re-query CCDS DB by Protein ID:NP_001092102Link to BLAST:NP_001092102.1
Original member Current member NCBI NM_001098633.4 NP_001092103.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001098633.4Link to Protein Sequence:NP_001092103.1Re-query CCDS DB by Nucleotide ID:NM_001098633Re-query CCDS DB by Protein ID:NP_001092103Link to BLAST:NP_001092103.1
Original member Current member NCBI NM_001278159.2 NP_001265088.1 Accepted alive Link to Nucleotide Sequence:NM_001278159.2Link to Protein Sequence:NP_001265088.1Re-query CCDS DB by Nucleotide ID:NM_001278159Re-query CCDS DB by Protein ID:NP_001265088Link to BLAST:NP_001265088.1
Original member Current member NCBI NM_001278160.2 NP_001265089.1 Accepted alive Link to Nucleotide Sequence:NM_001278160.2Link to Protein Sequence:NP_001265089.1Re-query CCDS DB by Nucleotide ID:NM_001278160Re-query CCDS DB by Protein ID:NP_001265089Link to BLAST:NP_001265089.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001092102.1 256 Q96B36-1 256 100% 0 0
NP_001092103.1 256 Q96B36-1 256 100% 0 0
NP_001265088.1 256 Q96B36-1 256 100% 0 0
NP_001265089.1 256 Q96B36-1 256 100% 0 0

Chromosomal Locations for CCDS 12784.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49869917 49870060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49871547 49871716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49871812 49871889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49872917 49873295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (771 nt):
ATGGCGTCGGGGCGCCCCGAGGAGCTGTGGGAGGCCGTGGTGGGGGCCGCTGAGCGCTTCCGGGCCCGGA
CTGGCACGGAGCTGGTGCTGCTGACCGCGGCCCCGCCGCCACCACCCCGCCCGGGCCCCTGTGCCTATGC
TGCCCATGGTCGAGGAGCCCTGGCGGAGGCAGCGCGCCGTTGCCTCCACGACATCGCACTGGCCCACAGG
GCTGCCACTGCTGCTCGGCCTCCTGCGCCCCCACCAGCACCACAGCCACCCAGTCCCACACCCAGCCCAC
CCCGGCCTACCCTGGCCAGAGAGGACAACGAGGAGGACGAGGATGAGCCCACAGAGACAGAGACCTCCGG
GGAGCAGCTGGGCATTAGTGATAATGGAGGGCTCTTTGTGATGGATGAGGACGCCACCCTCCAGGACCTT
CCCCCCTTCTGTGAGTCAGACCCCGAGAGTACAGATGATGGCAGCCTGAGCGAGGAGACCCCCGCCGGCC
CCCCCACCTGCTCAGTGCCCCCAGCCTCAGCCCTACCCACACAGCAGTACGCCAAGTCCCTGCCTGTGTC
TGTGCCCGTCTGGGGCTTCAAGGAGAAGAGGACAGAGGCGCGGTCATCAGATGAGGAGAATGGGCCGCCC
TCTTCGCCCGACCTGGACCGCATCGCGGCGAGCATGCGCGCGCTGGTGCTGCGAGAGGCCGAGGACACCC
AGGTCTTCGGGGACCTGCCACGGCCGCGGCTTAACACCAGCGACTTCCAGAAGCTGAAGCGGAAATATTG
A

Translation (256 aa):
MASGRPEELWEAVVGAAERFRARTGTELVLLTAAPPPPPRPGPCAYAAHGRGALAEAARRCLHDIALAHR
AATAARPPAPPPAPQPPSPTPSPPRPTLAREDNEEDEDEPTETETSGEQLGISDNGGLFVMDEDATLQDL
PPFCESDPESTDDGSLSEETPAGPPTCSVPPASALPTQQYAKSLPVSVPVWGFKEKRTEARSSDEENGPP
SSPDLDRIAASMRALVLREAEDTQVFGDLPRPRLNTSDFQKLKRKY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH