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Report for CCDS92554.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92554.1 Public Homo sapiens 19 ANKLE1 24 110 108 CCDS HistoryNCBI Gene:126549Re-query CCDS DB by CCDS ID:92554.1Re-query CCDS DB by GeneID:126549See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92554.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000652132.1 ENSP00000498416.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000652132.1Link to Ensembl Protein Viewer:ENSP00000498416.1Re-query CCDS DB by Nucleotide ID:ENST00000652132Re-query CCDS DB by Protein ID:ENSP00000498416
Original member Current member NCBI NM_001278443.2 NP_001265372.2 Accepted alive Link to Nucleotide Sequence:NM_001278443.2Link to Protein Sequence:NP_001265372.2Re-query CCDS DB by Nucleotide ID:NM_001278443Re-query CCDS DB by Protein ID:NP_001265372Link to BLAST:NP_001265372.2

Chromosomal Locations for CCDS 92554.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17281921 17281949 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17282057 17282209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17282656 17282761 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17282864 17283002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17283225 17283884 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17284089 17284266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17285431 17285590 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17285681 17285819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17286380 17286552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1737 nt):
ATGTGCTCGGAGGCCCGCCTGGCTCGCAGGGCAGTAGAGGAGCTGCTGCGCTGCGGCGCGGACCCTAATT
TGGTGCTAGAGGACGGCGCAGCGGCTGTGCACTTGGCGGCCGGAGCCCGGCACCCGCGCGGCCTGCGTTG
CCTCGGGGCCCTACTGCGCCAAGGCGGGGACCCCAACGCTCGATCTGTCGAGGCACTGACGCCGCTGCAT
GTGGCCGCCGCGTGGGGCTGCCGCCGCGGCCTGGAGCTGCTGCTGAGCCAAGGAGCGGACCCGGCGCTGC
GCGACCAGGACGGACTCCGGCCGCTGGACCTGGCCCTGCAGCAGGGACACCTGGAGTGCGCGCGAGTCCT
GCAGGATCTCGACACGCGGACCAGGACCCGGACCCGGATCGGGGCAGAGACTCAGGAGCCCGAGCCTGCA
CCTGGCACCCCAGGCCTCTCTGGACCTACCGATGAGACGCTGGACTCCATAGCACTCCAAAAGCAGCCAT
GCAGAGGTGACAACAGGGACATTGGCTTGGAGGCTGACCCAGGACCCCCCAGCCTCCCTGTTCCCCTTGA
AACTGTGGACAAACATGGGAGCTCGGCGTCCCCTCCAGGGCACTGGGATTACAGCTCAGACGCCTCTTTC
GTCACAGCGGTTGAGGTCTCTGGAGCTGAGGACCCAGCCTCGGACACTCCCCCCTGGGCTGGGTCATTGC
CACCGACCAGGCAGGGACTTCTGCATGTTGTCCATGCCAACCAGAGGGTACCTAGGTCTCAGGGCACGGA
GGCAGAACTGAATGCCCGTCTGCAGGCCCTGACTCTGACCCCACCAAATGCTGCTGGCTTCCAGTCCTCC
CCTTCCTCCATGCCTCTCCTGGACAGGAGTCCAGCTCATAGCCCCCCACGGACACCAACCCCTGGAGCTT
CTGACTGCCACTGCCTGTGGGAGCACCAGACATCCATTGATAGTGACATGGCCACGCTCTGGCTGACAGA
GGATGAGGCAAGCTCTACAGGTGGCAGGGAACCTGTCGGCCCTTGCCGGCACCTGCCAGTCTCCACTGTG
TCTGACTTGGAGTTGCTGAAGGGACTCCGAGCACTTGGCCCAGAGTTTTCAGGGCACAGCCTAGAACTGG
CTGCAGCCCTGCGGACGGGCTGTATTCCAGATGTCCAGGCAGATGAAGACGCGCTGGCCCAGCAGTTTGA
GCAGCCAGATCCTGCCAGGAGGTGGCGGGAGGGGGTCGTGAAGTCTAGCTTCACCTATCTGCTGCTGGAC
CCCAGGGAGACTCAGGACCTGCCAGCCCGAGCCTTCTCACTGACCCCAGCTGAGCGCCTTCAGACTTTCA
TCCGTGCCATCTTCTACGTGGGCAAAGGGACGAGGGCCCGGCCATATGTCCACCTCTGGGAGGCCCTTGG
TCACCATGGGCGGTCAAGAAAACAGCCCCACCAGGCCTGCCCCAAGGTGCGTCAGATCTTGGACATCTGG
GCCAGTGGTTGCGGTGTTGTGTCCCTACATTGCTTCCAGCACGTGGTCGCTGTGGAGGCTTATACACGGG
AGGCGTGTATTGTGGAAGCCCTAGGGATCCAGACGCTCACCAACCAGAAGCAAGGGCACTGCTATGGAGT
GGTGGCAGGCTGGCCACCTGCTCGTCGCCGGCGCTTGGGGGTGCACCTGCTGCACCGTGCCCTCCTTGTC
TTCCTGGCTGAAGGCGAGCGACAGCTTCATCCCCAGGACATCCAGGCCCGGGGCTGA

Translation (578 aa):
MCSEARLARRAVEELLRCGADPNLVLEDGAAAVHLAAGARHPRGLRCLGALLRQGGDPNARSVEALTPLH
VAAAWGCRRGLELLLSQGADPALRDQDGLRPLDLALQQGHLECARVLQDLDTRTRTRTRIGAETQEPEPA
PGTPGLSGPTDETLDSIALQKQPCRGDNRDIGLEADPGPPSLPVPLETVDKHGSSASPPGHWDYSSDASF
VTAVEVSGAEDPASDTPPWAGSLPPTRQGLLHVVHANQRVPRSQGTEAELNARLQALTLTPPNAAGFQSS
PSSMPLLDRSPAHSPPRTPTPGASDCHCLWEHQTSIDSDMATLWLTEDEASSTGGREPVGPCRHLPVSTV
SDLELLKGLRALGPEFSGHSLELAAALRTGCIPDVQADEDALAQQFEQPDPARRWREGVVKSSFTYLLLD
PRETQDLPARAFSLTPAERLQTFIRAIFYVGKGTRARPYVHLWEALGHHGRSRKQPHQACPKVRQILDIW
ASGCGVVSLHCFQHVVAVEAYTREACIVEALGIQTLTNQKQGHCYGVVAGWPPARRRRLGVHLLHRALLV
FLAEGERQLHPQDIQARG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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