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Report for CCDS56436.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56436.1 Public Homo sapiens 6 PGM3 24 110 108 CCDS HistoryNCBI Gene:5238Re-query CCDS DB by CCDS ID:56436.1Re-query CCDS DB by GeneID:5238See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56436.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000508748.6 ENSP00000424865.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000508748.6Link to Ensembl Protein Viewer:ENSP00000424865.2Re-query CCDS DB by Nucleotide ID:ENST00000508748Re-query CCDS DB by Protein ID:ENSP00000424865
Original member Current member EBI ENST00000506587.5 ENSP00000425809.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000506587.5Link to Ensembl Protein Viewer:ENSP00000425809.1Re-query CCDS DB by Nucleotide ID:ENST00000506587Re-query CCDS DB by Protein ID:ENSP00000425809
Original member Current member NCBI NM_001199917.2 NP_001186846.1 Accepted alive Link to Nucleotide Sequence:NM_001199917.2Link to Protein Sequence:NP_001186846.1Re-query CCDS DB by Nucleotide ID:NM_001199917Re-query CCDS DB by Protein ID:NP_001186846Link to BLAST:NP_001186846.1
Original member Current member NCBI NM_001367287.1 NP_001354216.1 Accepted alive Link to Nucleotide Sequence:NM_001367287.1Link to Protein Sequence:NP_001354216.1Re-query CCDS DB by Nucleotide ID:NM_001367287Re-query CCDS DB by Protein ID:NP_001354216Link to BLAST:NP_001354216.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186846.1 570 O95394-4 570 100% 0 0
NP_001354216.1 570 O95394-4 570 100% 0 0

Chromosomal Locations for CCDS 56436.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 83169234 83169323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83170305 83170478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83171937 83172059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83174374 83174487 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83175962 83176060 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83178673 83178756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83179810 83179967 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83181736 83181931 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83182845 83182978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83187008 83187075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83188614 83188798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83190809 83191014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83191187 83191268 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1713 nt):
ATGGGAGGAGAGTGGGGACAATCTGCTATCTGCCCTGAGTCTGCCCAGGAGTGGACATACCAAGTTGGAC
AACATCTTGTAGACATGGATTTAGGTGCTATTACAAAATACTCAGCATTACACGCCAAGCCCAATGGACT
GATCCTTCAATACGGGACTGCTGGATTTCGAACGAAGGCAGAACATCTTGATCATGTCATGTTTCGCATG
GGATTATTAGCTGTCCTGAGGTCAAAACAGACAAAATCCACTATAGGAGTCATGGTAACAGCGTCCCACA
ATCCTGAGGAAGACAATGGTGTAAAATTGGTTGATCCTTTGGGTGAAATGTTGGCACCATCCTGGGAGGA
ACATGCCACCTGTTTAGCAAATGCTGAGGAACAAGATATGCAGAGAGTGCTTATTGACATCAGCGAGAAA
GAAGCTGTGAATCTGCAACAAGATGCCTTTGTAGTTATTGGTAGAGATACCAGGCCCAGCAGTGAGAAAC
TTTCACAATCTGTAATAGATGGTGTGACTGTTCTAGGAGGTCAATTCCATGATTATGGCTTGTTAACAAC
ACCCCAGCTGCACTACATGGTGTATTGTCGAAACACGGGTGGCCGATATGGAAAGGCAACTATAGAAGGT
TACTACCAGAAACTCTCTAAGGCTTTTGTGGAACTCACCAAACAGGCTTCTTGCAGTGGAGATGAATACA
GATCACTTAAGGTTGACTGTGCAAATGGCATAGGGGCCCTGAAGCTAAGGGAAATGGAACACTACTTCTC
ACAGGGCCTGTCAGTTCAGCTGTTTAATGATGGGTCCAAGGGCAAACTCAATCATTTATGTGGAGCTGAC
TTTGTGAAAAGTCATCAGAAACCTCCACAGGGAATGGAAATTAAGTCCAATGAAAGATGCTGTTCTTTTG
ATGGAGATGCAGACAGAATTGTTTATTACTACCATGATGCAGATGGCCACTTTCATCTCATAGATGGAGA
CAAGATAGCAACGTTAATTAGCAGTTTCCTTAAAGAGCTCCTGGTGGAGATTGGAGAAAGTTTGAATATT
GGTGTTGTACAAACTGCATATGCAAATGGAAGTTCAACACGGTATCTTGAAGAAGTTATGAAGGTACCTG
TCTATTGCACTAAGACTGGTGTAAAACATTTGCACCACAAGGCTCAAGAGTTTGACATTGGAGTTTATTT
TGAAGCAAATGGGCATGGCACTGCACTGTTTAGTACAGCTGTTGAAATGAAGATAAAACAATCAGCAGAA
CAACTGGAAGATAAGAAAAGAAAAGCTGCTAAGATGCTTGAAAACATTATTGACTTGTTTAACCAGGCAG
CTGGTGATGCTATTTCTGACATGCTGGTGATTGAAGCAATCTTGGCTCTGAAGGGCTTGACTGTACAACA
GTGGGATGCTCTCTATACAGATCTTCCAAACAGACAACTTAAAGTTCAGGTTGCAGACAGGAGAGTTATT
AGCACTACCGATGCTGAAAGACAAGCAGTTACACCCCCAGGATTACAGGAGGCAATCAATGACCTGGTGA
AGAAGTACAAGCTTTCTCGAGCTTTTGTCCGGCCCTCTGGTACAGAAGATGTCGTCCGAGTATATGCAGA
AGCAGACTCACAAGAAAGTGCAGATCACCTTGCACATGAAGTGAGCTTGGCAGTATTTCAGCTGGCTGGA
GGAATTGGAGAAAGGCCCCAACCAGGTTTCTGA

Translation (570 aa):
MGGEWGQSAICPESAQEWTYQVGQHLVDMDLGAITKYSALHAKPNGLILQYGTAGFRTKAEHLDHVMFRM
GLLAVLRSKQTKSTIGVMVTASHNPEEDNGVKLVDPLGEMLAPSWEEHATCLANAEEQDMQRVLIDISEK
EAVNLQQDAFVVIGRDTRPSSEKLSQSVIDGVTVLGGQFHDYGLLTTPQLHYMVYCRNTGGRYGKATIEG
YYQKLSKAFVELTKQASCSGDEYRSLKVDCANGIGALKLREMEHYFSQGLSVQLFNDGSKGKLNHLCGAD
FVKSHQKPPQGMEIKSNERCCSFDGDADRIVYYYHDADGHFHLIDGDKIATLISSFLKELLVEIGESLNI
GVVQTAYANGSSTRYLEEVMKVPVYCTKTGVKHLHHKAQEFDIGVYFEANGHGTALFSTAVEMKIKQSAE
QLEDKKRKAAKMLENIIDLFNQAAGDAISDMLVIEAILALKGLTVQQWDALYTDLPNRQLKVQVADRRVI
STTDAERQAVTPPGLQEAINDLVKKYKLSRAFVRPSGTEDVVRVYAEADSQESADHLAHEVSLAVFQLAG
GIGERPQPGF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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