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Report for CCDS4742.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4742.1 Public Homo sapiens 6 PPT2 24 110 108 CCDS HistoryNCBI Gene:9374Re-query CCDS DB by CCDS ID:4742.1Re-query CCDS DB by GeneID:9374See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4742.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000324816.11 ENSP00000320528.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000324816.11Link to Ensembl Protein Viewer:ENSP00000320528.6Re-query CCDS DB by Nucleotide ID:ENST00000324816Re-query CCDS DB by Protein ID:ENSP00000320528
Original member Current member EBI ENST00000375137.6 ENSP00000364279.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375137.6Link to Ensembl Protein Viewer:ENSP00000364279.2Re-query CCDS DB by Nucleotide ID:ENST00000375137Re-query CCDS DB by Protein ID:ENSP00000364279
Original member Current member EBI ENST00000375143.6 ENSP00000364285.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000375143.6Link to Ensembl Protein Viewer:ENSP00000364285.2Re-query CCDS DB by Nucleotide ID:ENST00000375143Re-query CCDS DB by Protein ID:ENSP00000364285
Original member Current member EBI ENST00000395523.5 ENSP00000378894.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395523.5Link to Ensembl Protein Viewer:ENSP00000378894.1Re-query CCDS DB by Nucleotide ID:ENST00000395523Re-query CCDS DB by Protein ID:ENSP00000378894
Original member Current member NCBI NM_001204103.2 NP_001191032.1 Accepted alive Link to Nucleotide Sequence:NM_001204103.2Link to Protein Sequence:NP_001191032.1Re-query CCDS DB by Nucleotide ID:NM_001204103Re-query CCDS DB by Protein ID:NP_001191032Link to BLAST:NP_001191032.1
Original member Current member NCBI NM_005155.7 NP_005146.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_005155.7Link to Protein Sequence:NP_005146.4Re-query CCDS DB by Nucleotide ID:NM_005155Re-query CCDS DB by Protein ID:NP_005146Link to BLAST:NP_005146.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001191032.1 302 Q9UMR5-1 302 100% 0 0
NP_005146.4 302 Q9UMR5-1 302 100% 0 0

Chromosomal Locations for CCDS 4742.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 32154595 32154777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32155030 32155183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32155688 32155783 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32155871 32155978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32157637 32157720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32157840 32157924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32162568 32162622 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 32162807 32162950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (909 nt):
ATGCTGGGGCTCTGCGGGCAGCGGCTCCCCGCGGCGTGGGTCCTGCTTCTGTTGCCTTTCCTGCCGCTGC
TGCTGCTTGCAGCCCCCGCGCCCCACCGCGCGTCCTACAAGCCGGTCATCGTGGTGCATGGGCTCTTCGA
CAGCTCGTACAGCTTCCGCCACCTGCTGGAATACATCAATGAGACACACCCCGGGACTGTGGTGACAGTG
CTCGATCTCTTCGATGGGAGAGAGAGCTTGCGACCCCTGTGGGAACAGGTGCAAGGGTTCCGAGAGGCTG
TGGTCCCCATCATGGCAAAGGCCCCTCAAGGGGTGCATCTCATCTGCTACTCGCAGGGGGGCCTTGTGTG
CCGGGCTCTGCTTTCTGTCATGGATGATCACAACGTGGATTCTTTCATCTCCCTCTCCTCTCCACAGATG
GGACAGTATGGAGACACGGACTACTTGAAGTGGCTGTTCCCCACCTCCATGCGGTCTAACCTCTATCGGA
TCTGCTATAGCCCCTGGGGCCAGGAATTCTCCATCTGCAACTACTGGCATGATCCCCACCACGATGACTT
GTACCTCAATGCCAGCAGCTTCCTGGCCCTGATCAATGGGGAAAGAGACCATCCCAATGCCACAGTATGG
CGGAAGAACTTTCTGCGTGTGGGCCACCTGGTGCTGATTGGGGGCCCTGATGATGGTGTTATTACTCCCT
GGCAGTCCAGCTTCTTTGGTTTCTATGATGCAAATGAGACCGTCCTGGAGATGGAGGAGCAACTGGTTTA
TCTGCGGGATTCTTTTGGGTTGAAGACTCTATTGGCCCGGGGGGCCATAGTGAGGTGTCCAATGGCCGGT
ATCTCCCACACAGCCTGGCACTCCAACCGTACCCTTTATGAGACCTGCATTGAACCTTGGCTCTCCTGA

Translation (302 aa):
MLGLCGQRLPAAWVLLLLPFLPLLLLAAPAPHRASYKPVIVVHGLFDSSYSFRHLLEYINETHPGTVVTV
LDLFDGRESLRPLWEQVQGFREAVVPIMAKAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQM
GQYGDTDYLKWLFPTSMRSNLYRICYSPWGQEFSICNYWHDPHHDDLYLNASSFLALINGERDHPNATVW
RKNFLRVGHLVLIGGPDDGVITPWQSSFFGFYDANETVLEMEEQLVYLRDSFGLKTLLARGAIVRCPMAG
ISHTAWHSNRTLYETCIEPWLS


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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