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Report for CCDS5226.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5226.1 Public Homo sapiens 6 PPP1R14C 24 110 108 CCDS HistoryNCBI Gene:81706Re-query CCDS DB by CCDS ID:5226.1Re-query CCDS DB by GeneID:81706See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5226.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361131.5 ENSP00000355260.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000361131.5Link to Ensembl Protein Viewer:ENSP00000355260.4Re-query CCDS DB by Nucleotide ID:ENST00000361131Re-query CCDS DB by Protein ID:ENSP00000355260
Original member Current member NCBI NM_030949.3 NP_112211.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_030949.3Link to Protein Sequence:NP_112211.1Re-query CCDS DB by Nucleotide ID:NM_030949Re-query CCDS DB by Protein ID:NP_112211Link to BLAST:NP_112211.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_112211.1 165 Q8TAE6 165 100% 0 0

Chromosomal Locations for CCDS 5226.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 150143193 150143498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 150214744 150214827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 150216824 150216856 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 150248746 150248820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (498 nt):
ATGTCGGTGGCGACGGGCAGCAGCGAGACGGCCGGCGGGGCCAGCGGCGGCGGCGCACGGGTTTTCTTCC
AAAGCCCCCGGGGTGGCGCCGGTGGCAGCCCCGGCTCCAGCAGCGGCTCAGGCTCCTCCCGGGAGGACTC
GGCGCCCGTGGCCACGGCGGCCGCTGCAGGGCAGGTTCAGCAGCAACAGCAGCGGCGACACCAGCAGGGA
AAAGTGACAGTGAAATACGATCGTAAGGAGCTTCGGAAGCGGCTGGTGCTGGAGGAATGGATCGTGGAGC
AGCTGGGTCAGCTCTACGGCTGCGAGGAAGAAGAAATGCCAGAGGTAGAAATTGACATTGATGATCTTCT
TGATGCAGACAGTGATGAAGAGAGAGCTTCAAAATTACAGGAAGCTCTTGTAGACTGCTACAAACCAACA
GAGGAATTTATCAAAGAGCTGCTTTCTCGGATAAGAGGCATGAGGAAACTGAGCCCTCCGCAGAAGAAGA
GTGTATGA

Translation (165 aa):
MSVATGSSETAGGASGGGARVFFQSPRGGAGGSPGSSSGSGSSREDSAPVATAAAAGQVQQQQQRRHQQG
KVTVKYDRKELRKRLVLEEWIVEQLGQLYGCEEEEMPEVEIDIDDLLDADSDEERASKLQEALVDCYKPT
EEFIKELLSRIRGMRKLSPPQKKSV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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