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Report for CCDS43758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43758.1 Public Homo sapiens 8 RGS22 24 110 108 CCDS HistoryNCBI Gene:26166Re-query CCDS DB by CCDS ID:43758.1Re-query CCDS DB by GeneID:26166See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 43758.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000360863.11 ENSP00000354109.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000360863.11Link to Ensembl Protein Viewer:ENSP00000354109.6Re-query CCDS DB by Nucleotide ID:ENST00000360863Re-query CCDS DB by Protein ID:ENSP00000354109
Original member Current member NCBI NM_015668.5 NP_056483.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015668.5Link to Protein Sequence:NP_056483.3Re-query CCDS DB by Nucleotide ID:NM_015668Re-query CCDS DB by Protein ID:NP_056483Link to BLAST:NP_056483.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_056483.3 1264 Q8NE09-1 1264 100% 0 0

Chromosomal Locations for CCDS 43758.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 99962439 99962443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 99962687 99962767 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 99962885 99962978 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 99965335 99965430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 99977917 99978075 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 99981937 99982116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 99987458 99987619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 99996462 99996530 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 99999262 99999420 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100002202 100002364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100003926 100004098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100006017 100006109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100008375 100008569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100038931 100039032 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100039962 100040087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100041802 100041916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100047463 100047596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100052802 100052976 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100062591 100062752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100063416 100064043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100066167 100066296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100071369 100071537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100072145 100072230 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100080134 100080355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100093447 100093509 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100105374 100105402 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 100105897 100105921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3795 nt):
ATGCCCGAGAAGAGGCTCACCGCGGAGCCACCAACTATTACAGAAGAAGAATTTGAAGATTCTCTGGCAA
CAGATGATTTCCTTGTAGACTACTTTAATGAATTCCTAAGCCTTCCAACCTTTTCAGAGGCAATTAGATT
TAATGCAGATTATGGAGTTTTTGAAGTAGCTAATGATGCTCCACAATTTCTGGAAAAACAACTGAAAAAA
ATTCTACAAAACCAGCAACCTCGAAATCCCATTTATGATGTTGTAAGGAAAGGAAAGAATGAGGTTAAAC
CTGTTCAAATGAATGCCCCCGATGAAGATGAGACCATTAATGTCAACTACAATATTATGTGTCTCAGTCG
TGAAGAAGGTATTAAGTGGATCAAAAAAGAAAGACTTCCAGCATTTCTGGAAAGTGATTGTTACTTTGAA
TACAGGTTAGCCAAATTGGTCTCACAAGTAAGATGGAGCAAGTCCGGCATGAATTTCACAGTAGGATCAA
ATTTTTCTCCCTGGATCGTGAAAAAACCACCCAGTCTACCACCTCCTGCCACTGAAGAAGATAATCTTGT
AATTATGAAAAAGTTCTATGTATCACTTGGTGAGGCTTCCTATACTCAAACAAAAGATTGGTTTGCATTA
GCAAAACAAAGTCAGCAAACAGTATCAACCTTTTCGTTACCCTGTTGTGTACCCTACAACAAACTTAAAT
CACCAGCTATTTCATCTGTTTCTGAGAATTTTATCTTTGATGATGGAGTTCACCCTAGGACAAAAAAGGA
CCCATCTAAAACCAACAAATTGATTTCTGAATTTGAAGAAGAAGAAGGAGAAGAAGAAGAGGTGTCTGTA
TCTCTACAAGACACTCCTTCTCAAGCTCTTCTGAGAGTATACCTTGAAAAGAAACAGGATGTTGATGAAA
GCCTGACAATGCATTTCTCAACATGTGAAGAATTTTTAAGCTCCTATATATACTTTATTTTGAGAGGAGC
AATTCAGCAAATTGTTGGAAAGCCAGTTGGAGAAACCCCAGACTATATAAACTTCAACAATATAACAAAA
GTGTCATTTGATGATTGTTTTGAGTCTATTCATGGCAAGAATTTTTTAAGTGAATTAGTTCAAACTACAA
AGGAGAGGTCAGAAGAGATAGAACAAACAAGTTTAAGTTCAAAGAATGAGAGCGCTGGACCAGAGAGCAG
GGCGGACTGGTGTATTTCTCATAGGACTTATGACATTGGCAATAGAAAGGAGTTTGAAAGATTTAAGAAA
TTTATAAAAGGTACATTGGGAGAGAGATATTGGTGGCTATGGATGGATATTGAGAGGTTAAAAGTTCTTA
AGGATCCTGGAAGACATCAAAGACATCTTGAGAAGATGAAAAAATGCTATCTAGTGAGCAATGGAGATTA
CTACCTTTCTGCAGAAATCTTATCAAAATTTAAACTGTTAGATGGATCACAGTGGAATGAAGAGCATTTA
AGAAATATTCAGTCTGAAGTTTTAAAACCTTTACTTCTGTATTGGGCACCAAGATTCTGTGTTACTCATT
CAGCCTCAACAAAATATGCTAGTGCTGAACTGAAATTCTGGCACCTCCGTCAAGCAAAACCAAGGAAGGA
TATTGACCCTTTTCCACAAATGGCAACCCTCTTGCCATTAAGACCCAAATCTTGCATTCCACAGATACCT
GAGATCCAGAAAGAAGAATTCAGCTTATCACAACCTCCTAAATCTCCCAATAAATCACCTGAAGTAAAAA
CAGCAACTCAAAAGCCTTGGAAGCGGGAGCTTTTGTATCCAGGTTCTTCTAAGGATGATGTGATTGAGAA
AGGGTCAAAGTACATGTCAGAAAGCAGCAAAGTCATTCATTTAACATCTTTTACTGACATTTCTGAATGT
CTCAAGCCCCAGCTGGATAGAAGATACGCTTATACAGAAGAACCTAGGGTTAAAACCGTGTCAGATGTTG
GTGCCTTGGGAGGATCTGACATGGAAAATTTGTTGCAATCTTTGTATGTAGAAAATAGAGCTGGATTCTT
CTTTACTAAATTCTGCGAGCATTCAGGGAACAAGTTGTGGAAGAACAGTGTGTACTTTTGGTTTGACCTG
CAGGCTTATCATCAGCTTTTCTACCAAGAAACACTTCAGCCTTTTAAAGTATGCAAGCAAGCGCAATATC
TTTTTGCCACATACGTTGCTCCTTCTGCCACTCTTGACATTGGACTCCAACAGGAAAAGAAAAAAGAAAT
TTATATGAAAATACAGCCACCATTTGAAGACCTTTTTGACACAGCAGAGGAATATATCCTTCTCCTCCTT
CTTGAGCCATGGACAAAGATGGTAAAATCGGACCAAATTGCTTATAAAAAGGTGGAGCTGGTGGAAGAAA
CTCGACAGTTAGACTCCACATACTTCAGAAAGCTACAGGCTTTGCATAAAGAGACATTTTCCAAGAAAGC
TGAGGACACCACTTGTGAAATTGGAACTGGCATTTTATCACTCTCTAACGTCTCTAAACGAACAGAATAT
TGGGATAATGTTCCTGCAGAATACAAGCATTTTAAGTTTAGTGATCTGCTTAACAACAAACTGGAGTTTG
AACATTTCCGTCAGTTTCTTGAGACTCATTCTTCAAGCATGGATCTTATGTGCTGGACAGACATTGAGCA
GTTCCGGAGAATAACTTACAGAGATCGAAATCAAAGGAAGGCAAAATCTATATACATTAAAAACAAATAC
CTTAATAAAAAATATTTCTTTGGACCCAACAGTCCAGCTTCTCTGTATCAGCAGAACCAGGTAATGCATT
TAAGTGGTGGCTGGGGGAAGATTCTTCATGAGCAGCTTGATGCACCTGTTCTAGTTGAAATCCAGAAGCA
TGTGCAAAATAGGCTAGAAAATGTATGGCTGCCATTGTTTCTTGCAAGTGAACAGTTTGCAGCACGTCAG
AAGATAAAGGTACAGATGAAAGACATAGCAGAAGAGCTCTTACTACAGAAGGCTGAAAAGAAAATCGGGG
TCTGGAAGCCTGTGGAGAGTAAGTGGATCTCTTCATCTTGTAAAATCATTGCTTTTCGCAAAGCATTATT
GAATCCAGTTACTTCAAGACAATTTCAACGTTTTGTGGCTCTAAAAGGAGATTTATTGGAAAATGGTTTA
CTCTTTTGGCAAGAAGTACAAAAATATAAGGACTTGTGCCATTCTCATTGTGATGAGTCTGTCATCCAGA
AGAAGATTACAACTATTATCAACTGCTTTATTAATTCCAGTATTCCACCAGCTTTACAAATTGACATTCC
AGTAGAGCAAGCCCAGAAGATTATTGAACACCGGAAGGAGTTAGGACCATATGTATTTAGAGAGGCACAG
ATGACAATTTTTGGGGTTCTGTTTAAATTCTGGCCTCAGTTCTGTGAGTTTAGGAAGAATTTAACAGATG
AAAATATTATGAGTGTTTTAGAGAGAAGACAAGAATATAATAAGCAGAAAAAAAAATTGGCAGTCCTAGA
AGACGAAAAATCTGGAAAGGATGGAATCAAACAATATGCAAATACTTCAGTGCCTGCTATCAAAACTGCT
TTACTCAGTGATTCCTTCCTAGGCCTCCAACCATATGGCCGACAGCCAACCTGGTGCTACTCAAAGTATA
TAGAAGCCTTAGAACAGGAGAGAATTCTTCTTAAGATCCAAGAAGAACTAGAAAAAAAGTTGTTTGCAGG
CTTGCAACCTCTCACAAATTTTAAGGCTAGCTCTTCAACTATGTCTTTGAAAAAGAATATGTCTGCCCAC
AGCAGCCAGAAGTGA

Translation (1264 aa):
MPEKRLTAEPPTITEEEFEDSLATDDFLVDYFNEFLSLPTFSEAIRFNADYGVFEVANDAPQFLEKQLKK
ILQNQQPRNPIYDVVRKGKNEVKPVQMNAPDEDETINVNYNIMCLSREEGIKWIKKERLPAFLESDCYFE
YRLAKLVSQVRWSKSGMNFTVGSNFSPWIVKKPPSLPPPATEEDNLVIMKKFYVSLGEASYTQTKDWFAL
AKQSQQTVSTFSLPCCVPYNKLKSPAISSVSENFIFDDGVHPRTKKDPSKTNKLISEFEEEEGEEEEVSV
SLQDTPSQALLRVYLEKKQDVDESLTMHFSTCEEFLSSYIYFILRGAIQQIVGKPVGETPDYINFNNITK
VSFDDCFESIHGKNFLSELVQTTKERSEEIEQTSLSSKNESAGPESRADWCISHRTYDIGNRKEFERFKK
FIKGTLGERYWWLWMDIERLKVLKDPGRHQRHLEKMKKCYLVSNGDYYLSAEILSKFKLLDGSQWNEEHL
RNIQSEVLKPLLLYWAPRFCVTHSASTKYASAELKFWHLRQAKPRKDIDPFPQMATLLPLRPKSCIPQIP
EIQKEEFSLSQPPKSPNKSPEVKTATQKPWKRELLYPGSSKDDVIEKGSKYMSESSKVIHLTSFTDISEC
LKPQLDRRYAYTEEPRVKTVSDVGALGGSDMENLLQSLYVENRAGFFFTKFCEHSGNKLWKNSVYFWFDL
QAYHQLFYQETLQPFKVCKQAQYLFATYVAPSATLDIGLQQEKKKEIYMKIQPPFEDLFDTAEEYILLLL
LEPWTKMVKSDQIAYKKVELVEETRQLDSTYFRKLQALHKETFSKKAEDTTCEIGTGILSLSNVSKRTEY
WDNVPAEYKHFKFSDLLNNKLEFEHFRQFLETHSSSMDLMCWTDIEQFRRITYRDRNQRKAKSIYIKNKY
LNKKYFFGPNSPASLYQQNQVMHLSGGWGKILHEQLDAPVLVEIQKHVQNRLENVWLPLFLASEQFAARQ
KIKVQMKDIAEELLLQKAEKKIGVWKPVESKWISSSCKIIAFRKALLNPVTSRQFQRFVALKGDLLENGL
LFWQEVQKYKDLCHSHCDESVIQKKITTIINCFINSSIPPALQIDIPVEQAQKIIEHRKELGPYVFREAQ
MTIFGVLFKFWPQFCEFRKNLTDENIMSVLERRQEYNKQKKKLAVLEDEKSGKDGIKQYANTSVPAIKTA
LLSDSFLGLQPYGRQPTWCYSKYIEALEQERILLKIQEELEKKLFAGLQPLTNFKASSSTMSLKKNMSAH
SSQK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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