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Report for CCDS629.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
629.1 Public Homo sapiens 1 AK4 24 110 108 CCDS HistoryNCBI Gene:205Re-query CCDS DB by CCDS ID:629.1Re-query CCDS DB by GeneID:205See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 629.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000327299.8 ENSP00000322175.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000327299.8Link to Ensembl Protein Viewer:ENSP00000322175.7Re-query CCDS DB by Nucleotide ID:ENST00000327299Re-query CCDS DB by Protein ID:ENSP00000322175
Original member Current member EBI ENST00000395334.6 ENSP00000378743.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395334.6Link to Ensembl Protein Viewer:ENSP00000378743.2Re-query CCDS DB by Nucleotide ID:ENST00000395334Re-query CCDS DB by Protein ID:ENSP00000378743
Original member Current member EBI ENST00000545314.5 ENSP00000445912.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000545314.5Link to Ensembl Protein Viewer:ENSP00000445912.1Re-query CCDS DB by Nucleotide ID:ENST00000545314Re-query CCDS DB by Protein ID:ENSP00000445912
Original member Current member NCBI NM_001005353.3 NP_001005353.1 Accepted alive Link to Nucleotide Sequence:NM_001005353.3Link to Protein Sequence:NP_001005353.1Re-query CCDS DB by Nucleotide ID:NM_001005353Re-query CCDS DB by Protein ID:NP_001005353Link to BLAST:NP_001005353.1
Original member Current member NCBI NM_013410.4 NP_037542.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013410.4Link to Protein Sequence:NP_037542.1Re-query CCDS DB by Nucleotide ID:NM_013410Re-query CCDS DB by Protein ID:NP_037542Link to BLAST:NP_037542.1
Original member Current member NCBI NM_203464.3 NP_982289.1 Accepted alive Link to Nucleotide Sequence:NM_203464.3Link to Protein Sequence:NP_982289.1Re-query CCDS DB by Nucleotide ID:NM_203464Re-query CCDS DB by Protein ID:NP_982289Link to BLAST:NP_982289.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001005353.1 223 P27144 223 100% 0 0
NP_037542.1 223 P27144 223 100% 0 0
NP_982289.1 223 P27144 223 100% 0 0

Chromosomal Locations for CCDS 629.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 65148408 65148552 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65190710 65190829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65218754 65218926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65224752 65224870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 65226063 65226177 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (672 nt):
ATGGCTTCCAAACTCCTGCGCGCGGTCATCCTCGGGCCGCCCGGCTCGGGCAAGGGCACCGTGTGCCAGA
GGATCGCCCAGAACTTTGGTCTCCAGCATCTCTCCAGCGGCCACTTCTTGCGGGAGAACATCAAGGCCAG
CACCGAAGTTGGTGAGATGGCAAAGCAGTATATAGAGAAAAGTCTTTTGGTTCCAGACCATGTGATCACA
CGCCTAATGATGTCCGAGTTGGAGAACAGGCGTGGCCAGCACTGGCTCCTTGATGGTTTTCCTAGGACAT
TAGGACAAGCCGAAGCCCTGGACAAAATCTGTGAAGTGGATCTAGTGATCAGTTTGAATATTCCATTTGA
AACACTTAAAGATCGTCTCAGCCGCCGTTGGATTCACCCTCCTAGCGGAAGGGTATATAACCTGGACTTC
AATCCACCTCATGTACATGGTATTGATGACGTCACTGGTGAACCGTTAGTCCAGCAGGAGGATGATAAAC
CCGAAGCAGTTGCTGCCAGGCTAAGACAGTACAAAGACGTGGCAAAGCCAGTCATTGAATTATACAAGAG
CCGAGGAGTGCTCCACCAATTTTCCGGAACGGAGACGAACAAAATCTGGCCCTACGTTTACACACTTTTC
TCAAACAAGATCACACCTATTCAGTCCAAAGAAGCATATTGA

Translation (223 aa):
MASKLLRAVILGPPGSGKGTVCQRIAQNFGLQHLSSGHFLRENIKASTEVGEMAKQYIEKSLLVPDHVIT
RLMMSELENRRGQHWLLDGFPRTLGQAEALDKICEVDLVISLNIPFETLKDRLSRRWIHPPSGRVYNLDF
NPPHVHGIDDVTGEPLVQQEDDKPEAVAARLRQYKDVAKPVIELYKSRGVLHQFSGTETNKIWPYVYTLF
SNKITPIQSKEAY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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