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Report for CCDS33054.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33054.1 Public Homo sapiens 19 DMWD 24 110 108 CCDS HistoryNCBI Gene:1762Re-query CCDS DB by CCDS ID:33054.1Re-query CCDS DB by GeneID:1762See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33054.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270223.7 ENSP00000270223.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000270223.7Link to Ensembl Protein Viewer:ENSP00000270223.5Re-query CCDS DB by Nucleotide ID:ENST00000270223Re-query CCDS DB by Protein ID:ENSP00000270223
Original member Current member NCBI NM_004943.2 NP_004934.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004943.2Link to Protein Sequence:NP_004934.1Re-query CCDS DB by Nucleotide ID:NM_004943Re-query CCDS DB by Protein ID:NP_004934Link to BLAST:NP_004934.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_004934.1 674 Q09019 674 100% 0 0

Chromosomal Locations for CCDS 33054.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45784243 45784290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45784641 45784715 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45785594 45786871 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45790905 45791087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 45792316 45792756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2025 nt):
ATGGCGGCGGGCGGCGCGGAGGGCGGCTCGGGCCCCGGCGCCGCCATGGGGGACTGCGCGGAGATTAAGT
CGCAATTCCGCACGCGCGAGGGTTTCTACAAGCTACTCCCGGGCGACGGCGCCGCTCGCAGGTCGGGTCC
GGCTTCCGCCCAGACTCCGGTGCCGCCTCAGCCACCGCAGCCCCCGCCCGGCCCTGCCTCCGCCTCCGGT
CCCGGCGCTGCAGGCCCCGCGTCGTCCCCGCCGCCCGCAGGCCCCGGACCCGGGCCCGCCCTGCCCGCCG
TGCGCCTCAGCCTCGTGCGCCTCGGGGAGCCGGACAGCGCCGGGGCCGGGGAGCCGCCCGCCACGCCCGC
GGGGCTGGGCTCGGGGGGAGACCGCGTCTGCTTCAACTTGGGCCGTGAGCTCTATTTCTACCCAGGCTGC
TGTCGTCGTGGGAGCCAACGGTCCATTGACCTCAACAAGCCAATTGACAAGCGGATCTACAAGGGCACCC
AGCCCACCTGCCACGATTTCAACCAGTTCACTGCTGCCACCGAGACCATCTCGCTGCTGGTGGGCTTCTC
AGCGGGTCAAGTGCAGTACCTGGATCTCATCAAAAAGGACACCAGCAAGCTGTTCAATGAGGAGCGGTTG
ATCGACAAGACCAAGGTGACATATCTGAAGTGGCTGCCTGAGTCGGAGAGCCTGTTCCTGGCATCACACG
CCAGTGGCCACCTGTACCTGTACAACGTCAGCCACCCCTGCGCCTCGGCCCCGCCCCAGTACAGCCTGCT
GAAGCAGGGCGAGGGCTTCTCTGTCTATGCTGCCAAGAGCAAGGCACCCCGCAACCCGCTGGCCAAGTGG
GCGGTGGGTGAGGGGCCCCTCAACGAGTTCGCCTTCTCGCCCGATGGCCGGCACCTGGCCTGTGTGAGCC
AGGATGGCTGCCTGCGCGTCTTCCACTTCGACTCCATGCTCCTGCGTGGGCTCATGAAGAGCTACTTTGG
GGGCCTGCTGTGTGTGTGCTGGAGCCCTGACGGCCGCTACGTGGTGACGGGTGGCGAAGATGACCTGGTC
ACCGTGTGGTCCTTCACCGAGGGCCGCGTGGTGGCTCGAGGCCATGGCCACAAGTCCTGGGTCAACGCTG
TGGCCTTTGACCCCTACACCACAAGGGCAGAGGAGGCGGCGACAGCAGCCGGTGCTGATGGGGAGCGGAG
CGGCGAAGAGGAGGAGGAGGAGCCCGAGGCTGCGGGCACAGGCTCGGCCGGGGGCGCCCCGCTCTCTCCA
CTGCCCAAGGCTGGCTCCATTACTTACCGCTTTGGCTCGGCGGGCCAGGACACGCAGTTCTGCCTGTGGG
ACCTCACTGAAGACGTGCTCTACCCGCACCCCCCCCTGGCCCGCACCCGCACCCTCCCTGGCACACCTGG
CACCACGCCACCGGCCGCCAGCAGCTCGAGGGGTGGCGAGCCTGGCCCAGGCCCCCTGCCTCGCTCGCTG
TCCCGCTCCAACAGTCTCCCGCACCCAGCTGGCGGGGGCAAGGCGGGCGGCCCGGGTGTGGCGGCAGAGC
CTGGCACACCATTCAGCATTGGCCGCTTCGCCACGCTCACACTGCAGGAGCGGCGGGACCGGGGGGCAGA
GAAGGAGCACAAGCGCTACCACAGCCTGGGCAACATCAGCCGGGGTGGCAGTGGCGGCAGTGGCAGTGGT
GGGGAGAAGCCCAGCGGCCCTGTTCCCCGCAGCCGCCTGGACCCCGCCAAGGTGCTGGGCACTGCGCTGT
GCCCGCGCATCCACGAGGTGCCCCTGCTGGAGCCCCTTGTGTGCAAGAAGATCGCCCAGGAGCGGCTCAC
AGTCCTCCTGTTCCTGGAGGACTGCATCATCACTGCCTGCCAGGAGGGCCTCATCTGCACCTGGGCCCGG
CCGGGCAAGGCGTTCACAGACGAGGAGACCGAGGCCCAGACAGGGGAAGGAAGTTGGCCCAGGTCACCCA
GCAAGTCAGTGGTAGAGGGCATCTCCTCCCAACCAGGCAACTCCCCGAGTGGCACAGTGGTGTGA

Translation (674 aa):
MAAGGAEGGSGPGAAMGDCAEIKSQFRTREGFYKLLPGDGAARRSGPASAQTPVPPQPPQPPPGPASASG
PGAAGPASSPPPAGPGPGPALPAVRLSLVRLGEPDSAGAGEPPATPAGLGSGGDRVCFNLGRELYFYPGC
CRRGSQRSIDLNKPIDKRIYKGTQPTCHDFNQFTAATETISLLVGFSAGQVQYLDLIKKDTSKLFNEERL
IDKTKVTYLKWLPESESLFLASHASGHLYLYNVSHPCASAPPQYSLLKQGEGFSVYAAKSKAPRNPLAKW
AVGEGPLNEFAFSPDGRHLACVSQDGCLRVFHFDSMLLRGLMKSYFGGLLCVCWSPDGRYVVTGGEDDLV
TVWSFTEGRVVARGHGHKSWVNAVAFDPYTTRAEEAATAAGADGERSGEEEEEEPEAAGTGSAGGAPLSP
LPKAGSITYRFGSAGQDTQFCLWDLTEDVLYPHPPLARTRTLPGTPGTTPPAASSSRGGEPGPGPLPRSL
SRSNSLPHPAGGGKAGGPGVAAEPGTPFSIGRFATLTLQERRDRGAEKEHKRYHSLGNISRGGSGGSGSG
GEKPSGPVPRSRLDPAKVLGTALCPRIHEVPLLEPLVCKKIAQERLTVLLFLEDCIITACQEGLICTWAR
PGKAFTDEETEAQTGEGSWPRSPSKSVVEGISSQPGNSPSGTVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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