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Report for CCDS12810.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12810.1 Public Homo sapiens 19 KLK5 24 110 108 CCDS HistoryNCBI Gene:25818Re-query CCDS DB by CCDS ID:12810.1Re-query CCDS DB by GeneID:25818See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12810.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000336334.8 ENSP00000337733.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000336334.8Link to Ensembl Protein Viewer:ENSP00000337733.2Re-query CCDS DB by Nucleotide ID:ENST00000336334Re-query CCDS DB by Protein ID:ENSP00000337733
Original member Current member EBI ENST00000391809.6 ENSP00000375685.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391809.6Link to Ensembl Protein Viewer:ENSP00000375685.1Re-query CCDS DB by Nucleotide ID:ENST00000391809Re-query CCDS DB by Protein ID:ENSP00000375685
Original member Current member EBI ENST00000593428.5 ENSP00000471966.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000593428.5Link to Ensembl Protein Viewer:ENSP00000471966.1Re-query CCDS DB by Nucleotide ID:ENST00000593428Re-query CCDS DB by Protein ID:ENSP00000471966
Original member Current member NCBI NM_001077491.2 NP_001070959.1 Accepted alive Link to Nucleotide Sequence:NM_001077491.2Link to Protein Sequence:NP_001070959.1Re-query CCDS DB by Nucleotide ID:NM_001077491Re-query CCDS DB by Protein ID:NP_001070959Link to BLAST:NP_001070959.1
Original member Current member NCBI NM_001077492.2 NP_001070960.1 Accepted alive Link to Nucleotide Sequence:NM_001077492.2Link to Protein Sequence:NP_001070960.1Re-query CCDS DB by Nucleotide ID:NM_001077492Re-query CCDS DB by Protein ID:NP_001070960Link to BLAST:NP_001070960.1
Original member Current member NCBI NM_012427.5 NP_036559.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_012427.5Link to Protein Sequence:NP_036559.1Re-query CCDS DB by Nucleotide ID:NM_012427Re-query CCDS DB by Protein ID:NP_036559Link to BLAST:NP_036559.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001070959.1 293 Q9Y337 293 100% 0 0
NP_001070960.1 293 Q9Y337 293 100% 0 0
NP_036559.1 293 Q9Y337 293 100% 0 0

Chromosomal Locations for CCDS 12810.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 50943631 50943786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50948640 50948773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50948859 50949115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50949855 50950116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50952585 50952657 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (882 nt):
ATGGCTACAGCAAGACCCCCCTGGATGTGGGTGCTCTGTGCTCTGATCACAGCCTTGCTTCTGGGGGTCA
CAGAGCATGTTCTCGCCAACAATGATGTTTCCTGTGACCACCCCTCTAACACCGTGCCCTCTGGGAGCAA
CCAGGACCTGGGAGCTGGGGCCGGGGAAGACGCCCGGTCGGATGACAGCAGCAGCCGCATCATCAATGGA
TCCGACTGCGATATGCACACCCAGCCGTGGCAGGCCGCGCTGTTGCTAAGGCCCAACCAGCTCTACTGCG
GGGCGGTGTTGGTGCATCCACAGTGGCTGCTCACGGCCGCCCACTGCAGGAAGAAAGTTTTCAGAGTCCG
TCTCGGCCACTACTCCCTGTCACCAGTTTATGAATCTGGGCAGCAGATGTTCCAGGGGGTCAAATCCATC
CCCCACCCTGGCTACTCCCACCCTGGCCACTCTAACGACCTCATGCTCATCAAACTGAACAGAAGAATTC
GTCCCACTAAAGATGTCAGACCCATCAACGTCTCCTCTCATTGTCCCTCTGCTGGGACAAAGTGCTTGGT
GTCTGGCTGGGGGACAACCAAGAGCCCCCAAGTGCACTTCCCTAAGGTCCTCCAGTGCTTGAATATCAGC
GTGCTAAGTCAGAAAAGGTGCGAGGATGCTTACCCGAGACAGATAGATGACACCATGTTCTGCGCCGGTG
ACAAAGCAGGTAGAGACTCCTGCCAGGGTGATTCTGGGGGGCCTGTGGTCTGCAATGGCTCCCTGCAGGG
ACTCGTGTCCTGGGGAGATTACCCTTGTGCCCGGCCCAACAGACCGGGTGTCTACACGAACCTCTGCAAG
TTCACCAAGTGGATCCAGGAAACCATCCAGGCCAACTCCTGA

Translation (293 aa):
MATARPPWMWVLCALITALLLGVTEHVLANNDVSCDHPSNTVPSGSNQDLGAGAGEDARSDDSSSRIING
SDCDMHTQPWQAALLLRPNQLYCGAVLVHPQWLLTAAHCRKKVFRVRLGHYSLSPVYESGQQMFQGVKSI
PHPGYSHPGHSNDLMLIKLNRRIRPTKDVRPINVSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNIS
VLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDSGGPVVCNGSLQGLVSWGDYPCARPNRPGVYTNLCK
FTKWIQETIQANS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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