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Report for CCDS31208.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
31208.1 Public Homo sapiens 10 ARID5B 24 110 108 CCDS HistoryNCBI Gene:84159Re-query CCDS DB by CCDS ID:31208.1Re-query CCDS DB by GeneID:84159See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 31208.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000279873.12 ENSP00000279873.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000279873.12Link to Ensembl Protein Viewer:ENSP00000279873.7Re-query CCDS DB by Nucleotide ID:ENST00000279873Re-query CCDS DB by Protein ID:ENSP00000279873
Original member Current member NCBI NM_032199.3 NP_115575.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032199.3Link to Protein Sequence:NP_115575.1Re-query CCDS DB by Nucleotide ID:NM_032199Re-query CCDS DB by Protein ID:NP_115575Link to BLAST:NP_115575.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115575.1 1188 Q14865-1 1188 100% 0 0

Chromosomal Locations for CCDS 31208.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 61901710 61901730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61902159 61902413 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 61940183 61940408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62000091 62000321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62050888 62051000 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62057117 62057318 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62059243 62059295 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62069700 62069797 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62085702 62085900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 62090862 62093030 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3567 nt):
ATGGAGCCCAACTCACTCCAGTGGGTCGGCTCACCGTGTGGCTTGCACGGACCTTACATTTTCTACAAGG
CTTTTCAATTCCACCTTGAAGGCAAACCAAGAATTTTGTCCCTTGGCGACTTTTTCTTTGTAAGATGTAC
GCCAAAGGATCCGATTTGCATAGCGGAGCTCCAGCTGTTGTGGGAAGAGAGGACCAGCCGGCAACTTTTA
TCCAGCTCTAAACTTTATTTCCTCCCAGAAGACACTCCCCAGGGCAGAAATAGCGACCATGGCGAGGATG
AAGTCATTGCTGTTTCCGAAAAGGTGATTGTGAAGCTTGAAGACCTGGTCAAGTGGGTACATTCTGATTT
CTCCAAGTGGAGATGTGGCTTCCACGCTGGACCAGTGAAAACTGAGGCCTTGGGAAGGAATGGACAGAAG
GAAGCTCTGCTGAAGTACAGGCAGTCAACCCTAAACAGTGGACTCAACTTCAAAGACGTTCTCAAGGAGA
AGGCAGACCTGGGGGAGGACGAGGAAGAAACGAACGTGATAGTTCTCAGCTACCCCCAGTACTGCCGGTA
CCGCTCGATGCTGAAACGCATCCAGGATAAGCCATCTTCCATTCTAACGGACCAGTTTGCATTGGCCCTG
GGGGGCATTGCAGTGGTCAGCAGGAACCCTCAGATCCTGTACTGTCGGGACACCTTTGACCACCCGACTC
TCATAGAAAACGAGAGTATATGCGATGAGTTTGCGCCAAATCTTAAAGGCAGACCACGCAAAAAGAAACC
ATGCCCACAAAGAAGAGATTCATTCAGTGGTGTTAAGGATTCCAACAACAATTCCGATGGCAAAGCCGTT
GCCAAGGTGAAATGTGAGGCCAGGTCAGCCTTGACCAAGCCGAAGAATAACCATAACTGTAAAAAAGTCT
CAAATGAAGAAAAACCAAAGGTTGCCATTGGTGAAGAGTGCAGGGCAGATGAACAAGCCTTCTTGGTGGC
ACTTTATAAATACATGAAAGAAAGGAAAACGCCGATAGAACGAATACCCTATTTAGGTTTTAAACAGATT
AACCTTTGGACTATGTTTCAAGCTGCTCAAAAACTGGGAGGATATGAAACAATAACAGCCCGCCGTCAGT
GGAAACATATTTATGATGAATTAGGCGGTAATCCTGGGAGCACCAGCGCTGCCACTTGTACCCGCAGACA
TTATGAAAGATTAATCCTACCATATGAAAGATTTATTAAAGGAGAAGAAGATAAGCCCCTGCCTCCAATC
AAACCTCGGAAACAGGAGAACAGTTCACAGGAAAATGAGAACAAAACAAAAGTATCTGGAACCAAACGCA
TCAAACATGAAATACCTAAAAGCAAGAAAGAAAAAGAAAATGCCCCAAAGCCCCAGGATGCAGCAGAGGT
TTCATCAGAGCAAGAAAAAGAACAAGAGACTTTAATAAGCCAGAAAAGCATCCCTGAGCCTCTCCCAGCA
GCAGACATGAAGAAAAAAATAGAAGGGTATCAGGAATTTTCAGCGAAGCCCCTGGCATCCAGAGTAGACC
CAGAGAAGGACAACGAAACAGACCAAGGTTCCAACAGTGAGAAGGTGGCAGAGGAGGCGGGAGAGAAGGG
GCCCACACCTCCACTCCCAAGTGCTCCTCTGGCCCCAGAAAAAGATTCAGCCTTGGTCCCTGGGGCCAGC
AAACAGCCACTCACCTCTCCTAGTGCCCTGGTGGACTCAAAACAAGAATCCAAACTGTGCTGTTTTACAG
AGAGCCCTGAAAGTGAACCCCAAGAAGCATCCTTCCCCAGCTTCCCCACCACACAGCCACCGCTGGCAAA
CCAGAATGAGACGGAGGATGACAAACTGCCCGCCATGGCAGATTACATTGCCAACTGCACCGTGAAGGTG
GACCAGCTGGGCAGTGACGACATCCACAATGCGCTCAAGCAGACCCCAAAGGTCCTTGTGGTCCAGTCGT
TTGACATGTTCAAAGACAAAGACCTGACTGGGCCCATGAACGAGAACCATGGACTTAATTACACGCCCCT
GCTCTACTCTAGGGGCAACCCAGGCATCATGTCCCCACTGGCCAAGAAAAAGCTTTTGTCCCAAGTGAGT
GGGGCCAGCCTCTCCAGCAGCTACCCTTATGGCTCCCCACCCCCTTTGATCAGCAAAAAGAAACTGATTG
CTAGGGATGACTTGTGTTCCAGTTTGTCCCAGACCCACCATGGCCAAAGCACTGACCATATGGCGGTCAG
CCGGCCATCAGTGATTCAGCACGTCCAGAGTTTCAGAAGCAAGCCCTCGGAAGAGAGAAAGACCATCAAT
GACATCTTTAAGCATGAGAAACTGAGTCGATCAGATCCCCACCGCTGCAGCTTCTCCAAGCATCACCTTA
ACCCCCTTGCTGACTCCTACGTCCTGAAGCAAGAAATTCAGGAGGGCAAGGATAAACTCTTAGAGAAAAG
GGCCCTCCCCCATTCCCACATGCCTAGCTTCCTGGCTGACTTCTACTCGTCCCCTCATCTCCATAGCCTC
TACAGACACACCGAGCACCATCTTCATAATGAACAGACATCCAAATACCCTTCCAGGGACATGTACAGGG
AATCGGAAAACAGTTCTTTTCCTTCCCACAGACACCAAGAAAAGCTCCATGTAAATTATCTCACGTCCCT
GCACCTGCAAGACAAAAAGTCGGCGGCAGCAGAAGCCCCTACGGATGATCAGCCTACAGATCTGAGCCTT
CCCAAGAACCCGCACAAACCTACCGGCAAGGTCCTGGGCCTGGCTCATTCCACCACAGGGCCCCAGGAGA
GCAAAGGCATCTCCCAGTTCCAGGTCTTAGGCAGCCAGAGTCGAGACTGTCACCCCAAAGCCTGTCGGGT
ATCACCCATGACCATGTCAGGCCCTAAAAAATACCCTGAATCGCTTTCAAGATCAGGAAAACCTCACCAT
GTGAGACTGGAGAATTTCAGGAAGATGGAAGGCATGGTCCACCCAATCCTGCACCGGAAAATGAGCCCGC
AGAACATTGGGGCGGCGCGGCCGATCAAGCGCAGCCTGGAGGATTTGGACCTTGTGATTGCAGGGAAAAA
GGCCCGGGCAGTGTCTCCCTTAGACCCATCCAAGGAGGTCTCTGGGAAGGAGAAGGCCTCTGAGCAGGAG
AGTGAAGGCAGCAAAGCAGCGCACGGTGGGCATTCCGGGGGCGGATCAGAAGGCCACAAGCTTCCCCTCT
CCTCCCCTATCTTCCCAGGTCTGTATTCCGGGAGCCTGTGTAACTCGGGCCTCAACTCCAGGCTCCCGGC
TGGGTATTCTCATTCTCTGCAGTACTTGAAAAACCAGACTGTGCTTTCTCCACTCATGCAGCCCCTGGCT
TTCCACTCGCTTGTGATGCAAAGAGGAATTTTTACATCACCGACAAATTCTCAGCAGCTGTACAGACACT
TGGCTGCGGCTACACCTGTAGGAAGTTCATATGGGGACCTTTTGCATAACAGCATTTACCCTTTAGCTGC
TATAAATCCTCAAGCTGCCTTTCCATCTTCCCAGCTGTCATCCGTGCACCCCAGTACAAAACTGTAG

Translation (1188 aa):
MEPNSLQWVGSPCGLHGPYIFYKAFQFHLEGKPRILSLGDFFFVRCTPKDPICIAELQLLWEERTSRQLL
SSSKLYFLPEDTPQGRNSDHGEDEVIAVSEKVIVKLEDLVKWVHSDFSKWRCGFHAGPVKTEALGRNGQK
EALLKYRQSTLNSGLNFKDVLKEKADLGEDEEETNVIVLSYPQYCRYRSMLKRIQDKPSSILTDQFALAL
GGIAVVSRNPQILYCRDTFDHPTLIENESICDEFAPNLKGRPRKKKPCPQRRDSFSGVKDSNNNSDGKAV
AKVKCEARSALTKPKNNHNCKKVSNEEKPKVAIGEECRADEQAFLVALYKYMKERKTPIERIPYLGFKQI
NLWTMFQAAQKLGGYETITARRQWKHIYDELGGNPGSTSAATCTRRHYERLILPYERFIKGEEDKPLPPI
KPRKQENSSQENENKTKVSGTKRIKHEIPKSKKEKENAPKPQDAAEVSSEQEKEQETLISQKSIPEPLPA
ADMKKKIEGYQEFSAKPLASRVDPEKDNETDQGSNSEKVAEEAGEKGPTPPLPSAPLAPEKDSALVPGAS
KQPLTSPSALVDSKQESKLCCFTESPESEPQEASFPSFPTTQPPLANQNETEDDKLPAMADYIANCTVKV
DQLGSDDIHNALKQTPKVLVVQSFDMFKDKDLTGPMNENHGLNYTPLLYSRGNPGIMSPLAKKKLLSQVS
GASLSSSYPYGSPPPLISKKKLIARDDLCSSLSQTHHGQSTDHMAVSRPSVIQHVQSFRSKPSEERKTIN
DIFKHEKLSRSDPHRCSFSKHHLNPLADSYVLKQEIQEGKDKLLEKRALPHSHMPSFLADFYSSPHLHSL
YRHTEHHLHNEQTSKYPSRDMYRESENSSFPSHRHQEKLHVNYLTSLHLQDKKSAAAEAPTDDQPTDLSL
PKNPHKPTGKVLGLAHSTTGPQESKGISQFQVLGSQSRDCHPKACRVSPMTMSGPKKYPESLSRSGKPHH
VRLENFRKMEGMVHPILHRKMSPQNIGAARPIKRSLEDLDLVIAGKKARAVSPLDPSKEVSGKEKASEQE
SEGSKAAHGGHSGGGSEGHKLPLSSPIFPGLYSGSLCNSGLNSRLPAGYSHSLQYLKNQTVLSPLMQPLA
FHSLVMQRGIFTSPTNSQQLYRHLAAATPVGSSYGDLLHNSIYPLAAINPQAAFPSSQLSSVHPSTKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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