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Report for CCDS32061.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32061.1 Public Homo sapiens 14 NOVA1 24 110 108 CCDS HistoryNCBI Gene:4857Re-query CCDS DB by CCDS ID:32061.1Re-query CCDS DB by GeneID:4857See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32061.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000539517.7 ENSP00000438875.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000539517.7Link to Ensembl Protein Viewer:ENSP00000438875.2Re-query CCDS DB by Nucleotide ID:ENST00000539517Re-query CCDS DB by Protein ID:ENSP00000438875
Original member Current member NCBI NM_002515.3 NP_002506.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002515.3Link to Protein Sequence:NP_002506.2Re-query CCDS DB by Nucleotide ID:NM_002515Re-query CCDS DB by Protein ID:NP_002506Link to BLAST:NP_002506.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002506.2 507 P51513-4 507 100% 0 0

Chromosomal Locations for CCDS 32061.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 26447959 26448963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26472320 26472391 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26479977 26480143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26595410 26595553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 26597301 26597436 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1524 nt):
ATGATGGCGGCAGCTCCCATCCAGCAGAACGGGACCCACACTGGGGTTCCCATAGACCTGGACCCGCCGG
ACTCGCGGAAAAGGCCGCTGGAAGCCCCCCCTGAAGCCGGCAGCACCAAGAGGACCAATACGGGCGAAGA
CGGCCAGTATTTTCTAAAGGTTCTCATACCTAGTTATGCTGCTGGATCTATAATTGGGAAGGGAGGACAG
ACAATTGTTCAGTTGCAAAAAGAAACTGGAGCCACCATCAAGCTGTCTAAGTCCAAAGATTTTTACCCAG
GTACTACTGAGCGAGTGTGCTTGATCCAGGGAACGGTTGAAGCACTGAATGCAGTTCATGGATTCATTGC
AGAAAAAATTCGAGAAATGCCCCAAAATGTGGCCAAGACAGAACCAGTCAGCATTCTACAACCCCAGACC
ACCGTTAATCCAGATCGCATCAAACAAACATTGCCATCTTCCCCAACTACCACCAAGTCCTCTCCATCTG
ATCCCATGACCACCTCCAGAGCTAATCAGGTAAAGATTATAGTTCCCAACAGCACAGCAGGTCTGATAAT
AGGGAAGGGAGGTGCTACTGTGAAGGCTGTAATGGAGCAGTCAGGGGCTTGGGTGCAGCTTTCCCAGAAA
CCTGATGGGATCAACTTGCAAGAGAGGGTTGTCACTGTGAGTGGAGAACCTGAACAAAACCGAAAAGCTG
TTGAACTTATCATCCAGAAGATACAAGAGGATCCACAAAGTGGCAGCTGTCTCAATATCAGTTATGCCAA
TGTGACAGGTCCAGTGGCAAATTCCAATCCAACCGGATCTCCTTATGCAAACACTGCTGAAGTGTTACCA
ACTGCTGCAGCAGCTGCAGGGCTATTAGGACATGCTAACCTTGCTGGCGTTGCAGCCTTTCCAGCAGTTT
TATCTGGCTTCACAGGCAATGACCTGGTGGCCATCACCTCTGCACTTAATACATTAGCCAGCTATGGATA
TAATCTCAACACTTTAGGTTTAGGTCTCAGTCAAGCAGCAGCAACAGGGGCTTTGGCTGCAGCAGCTGCC
AGTGCCAACCCAGCAGCAGCAGCAGCCAATTTATTGGCCACCTATGCCAGTGAAGCCTCAGCCAGTGGCA
GCACAGCTGGTGGTACGGCGGGGACATTTGCATTAGGTAGCCTGGCTGCTGCTACTGCTGCAACCAATGG
ATATTTTGGAGCTGCTTCTCCCCTAGCTGCCAGTGCCATTCTAGGAACAGAAAAGTCCACAGATGGATCC
AAGGATGTAGTTGAAATAGCAGTGCCAGAAAACTTAGTTGGTGCAATACTTGGCAAAGGAGGGAAAACAT
TAGTGGAATACCAGGAGTTGACTGGTGCAAGGATACAGATCTCCAAAAAAGGAGAATTCGTACCTGGCAC
AAGGAATCGGAAGGTAACCATTACTGGAACACCAGCTGCAACACAGGCTGCTCAATATTTAATTACACAA
AGGATCACATATGAGCAAGGAGTTCGGGCTGCCAATCCTCAGAAAGTGGGTTGA

Translation (507 aa):
MMAAAPIQQNGTHTGVPIDLDPPDSRKRPLEAPPEAGSTKRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQ
TIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQT
TVNPDRIKQTLPSSPTTTKSSPSDPMTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQK
PDGINLQERVVTVSGEPEQNRKAVELIIQKIQEDPQSGSCLNISYANVTGPVANSNPTGSPYANTAEVLP
TAAAAAGLLGHANLAGVAAFPAVLSGFTGNDLVAITSALNTLASYGYNLNTLGLGLSQAAATGALAAAAA
SANPAAAAANLLATYASEASASGSTAGGTAGTFALGSLAAATAATNGYFGAASPLAASAILGTEKSTDGS
KDVVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTPAATQAAQYLITQ
RITYEQGVRAANPQKVG


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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