NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS32948.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32948.1 Public Homo sapiens 19 HAUS8 24 110 108 CCDS HistoryNCBI Gene:93323Re-query CCDS DB by CCDS ID:32948.1Re-query CCDS DB by GeneID:93323See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32948.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000253669.10 ENSP00000253669.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000253669.10Link to Ensembl Protein Viewer:ENSP00000253669.4Re-query CCDS DB by Nucleotide ID:ENST00000253669Re-query CCDS DB by Protein ID:ENSP00000253669
Original member Current member NCBI NM_033417.2 NP_219485.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_033417.2Link to Protein Sequence:NP_219485.1Re-query CCDS DB by Nucleotide ID:NM_033417Re-query CCDS DB by Protein ID:NP_219485Link to BLAST:NP_219485.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_219485.1 410 Q9BT25-1 410 100% 0 0

Chromosomal Locations for CCDS 32948.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 17049873 17050176 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17052825 17052966 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17055861 17056002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17058549 17058707 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17058811 17058876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17059557 17059651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17059997 17060092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17062698 17062779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17069031 17069086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17073274 17073335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 17075394 17075422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1233 nt):
ATGGCGGATTCCTCGGGGCGAGGCGCTGGGAAGCCTGCAACCGGCCCCACAAATTCTAGCAGTGCCAAGA
AGAAGGATAAAAGAGTTCAAGGTGGAAGAGTGATTGAGTCCCGGTATCTGCAGTATGAAAAGAAGACAAC
CCAAAAGGCTCCTGCAGGAGATGGGTCACAGACCCGAGGGAAGATGTCTGAAGGTGGAAGGAAATCCAGC
CTGCTCCAGAAAAGCAAAGCAGATAGCAGTGGGGTCGGAAAGGGTGACCTGCAGTCCACGTTGCTGGAAG
GGCATGGCACAGCTCCACCTGACCTGGATCTCTCTGCTATTAATGACAAAAGCATCGTCAAAAAGACGCC
ACAGTTAGCAAAAACAATATCAAAGAAACCTGAGTCAACATCATTTTCTGCCCCTCGGAAAAAGAGCCCG
GATTTATCTGAAGCAATGGAAATGATGGAGTCTCAGACACTACTGCTGACGCTACTATCCGTAAAGATGG
AGAACAATCTTGCTGAGTTTGAAAGAAGGGCAGAAAAGAATTTATTAATAATGTGTAAGGAGAAGGAGAA
GCTACAGAAAAAGGCCCACGAGCTGAAGCGCAGGCTTCTCCTCTCTCAGAGGAAGCGGGAGCTGGCAGAT
GTCCTGGATGCCCAGATCGAGATGCTCAGCCCCTTCGAGGCAGTGGCCACACGCTTCAAGGAGCAATACA
GGACATTCGCCACGGCCCTGGACACTACCAGGCACGAGCTGCCCGTGAGGTCCATCCACCTGGAGGGAGA
TGGGCAGCAGCTCTTAGACGCCCTGCAGCATGAACTGGTGACCACTCAGCGCCTCCTGGGAGAACTTGAT
GTTGGTGATTCGGAAGAAAATGTGCAGGTGCTGGACTTACTGAGCGAACTCAAGGACGTGACGGCGAAAA
AGGACCTTGAGCTCCGAAGGAGCTTTGCCCAGGTGCTGGAACTCTCCGCAGAGGCAAGCAAAGAGGCAGC
CTTGGCAAACCAGGAAGTCTGGGAAGAGACCCAGGGCATGGCGCCCCCCAGCCGGTGGTATTTCAATCAA
GACAGTGCCTGCAGAGAATCTGGGGGAGCACCCAAGAACACGCCCCTGTCTGAGGACGACAACCCGGGTG
CCTCGTCAGCCCCCGCTCAGGCCACGTTCATCAGCCCAAGCGAAGATTTTTCTTCAAGCAGCCAGGCAGA
AGTCCCGCCCTCTCTCTCTCGTTCAGGGAGGGACTTGTCATGA

Translation (410 aa):
MADSSGRGAGKPATGPTNSSSAKKKDKRVQGGRVIESRYLQYEKKTTQKAPAGDGSQTRGKMSEGGRKSS
LLQKSKADSSGVGKGDLQSTLLEGHGTAPPDLDLSAINDKSIVKKTPQLAKTISKKPESTSFSAPRKKSP
DLSEAMEMMESQTLLLTLLSVKMENNLAEFERRAEKNLLIMCKEKEKLQKKAHELKRRLLLSQRKRELAD
VLDAQIEMLSPFEAVATRFKEQYRTFATALDTTRHELPVRSIHLEGDGQQLLDALQHELVTTQRLLGELD
VGDSEENVQVLDLLSELKDVTAKKDLELRRSFAQVLELSAEASKEAALANQEVWEETQGMAPPSRWYFNQ
DSACRESGGAPKNTPLSEDDNPGASSAPAQATFISPSEDFSSSSQAEVPPSLSRSGRDLS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH