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Report for CCDS5861.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5861.1 Public Homo sapiens 7 ADCK2 24 110 108 CCDS HistoryNCBI Gene:90956Re-query CCDS DB by CCDS ID:5861.1Re-query CCDS DB by GeneID:90956See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5861.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000072869.9 ENSP00000072869.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000072869.9Link to Ensembl Protein Viewer:ENSP00000072869.4Re-query CCDS DB by Nucleotide ID:ENST00000072869Re-query CCDS DB by Protein ID:ENSP00000072869
Original member Current member NCBI NM_052853.4 NP_443085.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052853.4Link to Protein Sequence:NP_443085.2Re-query CCDS DB by Nucleotide ID:NM_052853Re-query CCDS DB by Protein ID:NP_443085Link to BLAST:NP_443085.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443085.2 626 Q7Z695 626 100% 0 0

Chromosomal Locations for CCDS 5861.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 140673331 140674263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140674611 140674757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140679155 140679283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140681042 140681137 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140686990 140687241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140689597 140689725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140690760 140690813 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 140694663 140694803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1881 nt):
ATGGTGGCGCCCTGGCGCGTCTCCGTCAGGGTTTGCCTGTCGCACCTGAGGTGCTTCGAGCTCAGACAGG
GACTCAGCCTCCTGAGGCCCTCCGAGTGCCCTCGCGATGCCAGGCTCTGCTGGCTTCTGCTGGGCACTTT
GCCCAAGGTCGTCTCCCTGTGCGGGGACGTGGGTGAGGGGGCCCCTGACGTTCTGAGTCGGCGAAGGGTC
CGCTGCAGCGGGGCGGCTGGCGCGGGGCCCGCGGAGAGCCTCCCCCGAGCGGGACCTCTGGGCGGCGTCT
TCCTGCATCTCCGCCTCTGGCTTCGCGCCGGCGCTCTGTTGGTGAAATTCTTCCCCCTCCTACTCCTCTA
CCCCCTCACCTACCTGGCTCCCAGCGTCTCCACCCTCTGGCTCCACCTGCTTCTGAAAGCCACCGAGACC
TCAGGCCCAACCTACATCAAACTGGGCCAGTGGGCCAGCACCCGGCGCGATCTGTTTTCGGAGGCTTTCT
GTGCCCAATTTTCCAAGCTGCATGTCCGAGTGACGCCCCACCCGTGGACTCACACTGAGCGCTTCCTTCG
GCAGGCTTTTGGGGATGACTGGGGGAGCATCCTCTCTTTTGAGAACCGGGAACCTGTGGGCTCAGGCTGC
GTGGCCCAGGTGTACAAAGCATACGCCAACACTGCCTTCCTGGAGACTGACAGCGTCCAGAGACTTGGCA
GGGCCTCCTGTCTGCCGCCCTTCTCACATACTGGGGCAGTCGGTGGGCTGAGAGAGCTCTTTGGATACCT
TGGAAATGGCCGGAAACCTCCAGAAAATCTCGCAGACCAGTCGTTTCTAGAAAGGCTGCTCCTCCCTAAA
GCTGACCTGGTTGGATCAAATGCAGGGGTGTCTCGGGCTCAGGTCCCTGGCCACCAACCTGAGGCCACCA
ACCTCATCTCCGTGGCAGTGAAAGTGTTGCACCCTGGCCTGCTCGCTCAGGTGCATATGGACCTGCTGCT
GATGAAGATTGGCAGCCGAGTCCTGGGAGTTTTGCCAGGCATCAAGTGGCTTAGCTTGCCTGAGATTGTG
GAGGAATTTGAGAAGCTGATGGTCCAACAGATTGACCTGCGTTACGAAGCTCAGAATCTAGAACACTTCC
AGGTCAACTTCCGGAATGTGAAAGCCGTCAAGTTCCCCACCCCTCTGCGCCCCTTTGTCACCAGAGAAGT
CTTGGTGGAAACGTATGAAGAGAGTGTGCCTGTGTCCAGTTACCAGCAGGCAGGAATTCCCGTGGACTTG
AAAAGGAAGATTGCACGGCTGGGGATCAACATGCTCCTGAAGATGATATTTGTGGATAACTTTGTCCATG
CAGACCTTCACCCTGGAAACATCCTGGTTCAGGGTGCCAACGGCCTGTCCTCGAGTCAGGAGGCGCAGCT
GCAGCAGGCGGACATCTGTGACACTCTGGTGGTGGCCGTGCCATCTTCCCTCTGCCCGCTGCGACTGGTG
CTGCTGGATGCTGGCATTGTGGCGGAGCTGCAGGCCCCTGACCTGAGGAATTTCCGGGCAGTTTTCATGG
CTGTGGTGATGGGGCAGGGCCAGAGAGTGGCTGAGCTGATCCTGCATCATGCCCGGGCCAGCGAGTGCAG
GGACGTGGAGGGGTTCAAAACCGAGATGGCCATGCTGGTGACCCAGGCCAGGAAGAACACCATCACCCTG
GAGAAGCTTCATGTGTCCAGCCTTCTCTCTAGTGTCTTTAAGTTGCTGATGACTCACAAGGTAAAGCTTG
AGAGCAACTTTGCCTCCATTGTGTTTGCCATCATGGTGTTGGAGGGGCTTGGCCGCTCACTGGACCCCAA
ACTGGACATCCTGGAGGCAGCGAGGCCCTTCCTCCTCACGGGCCCAGTGTGCCCCCCGTGA

Translation (626 aa):
MVAPWRVSVRVCLSHLRCFELRQGLSLLRPSECPRDARLCWLLLGTLPKVVSLCGDVGEGAPDVLSRRRV
RCSGAAGAGPAESLPRAGPLGGVFLHLRLWLRAGALLVKFFPLLLLYPLTYLAPSVSTLWLHLLLKATET
SGPTYIKLGQWASTRRDLFSEAFCAQFSKLHVRVTPHPWTHTERFLRQAFGDDWGSILSFENREPVGSGC
VAQVYKAYANTAFLETDSVQRLGRASCLPPFSHTGAVGGLRELFGYLGNGRKPPENLADQSFLERLLLPK
ADLVGSNAGVSRAQVPGHQPEATNLISVAVKVLHPGLLAQVHMDLLLMKIGSRVLGVLPGIKWLSLPEIV
EEFEKLMVQQIDLRYEAQNLEHFQVNFRNVKAVKFPTPLRPFVTREVLVETYEESVPVSSYQQAGIPVDL
KRKIARLGINMLLKMIFVDNFVHADLHPGNILVQGANGLSSSQEAQLQQADICDTLVVAVPSSLCPLRLV
LLDAGIVAELQAPDLRNFRAVFMAVVMGQGQRVAELILHHARASECRDVEGFKTEMAMLVTQARKNTITL
EKLHVSSLLSSVFKLLMTHKVKLESNFASIVFAIMVLEGLGRSLDPKLDILEAARPFLLTGPVCPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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