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Report for CCDS8761.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8761.1 Public Homo sapiens 12 ASB8 24 110 108 CCDS HistoryNCBI Gene:140461Re-query CCDS DB by CCDS ID:8761.1Re-query CCDS DB by GeneID:140461See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8761.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000317697.8 ENSP00000320893.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000317697.8Link to Ensembl Protein Viewer:ENSP00000320893.3Re-query CCDS DB by Nucleotide ID:ENST00000317697Re-query CCDS DB by Protein ID:ENSP00000320893
Original member Current member EBI ENST00000536549.5 ENSP00000445622.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536549.5Link to Ensembl Protein Viewer:ENSP00000445622.1Re-query CCDS DB by Nucleotide ID:ENST00000536549Re-query CCDS DB by Protein ID:ENSP00000445622
Original member Current member NCBI NM_001319296.2 NP_001306225.1 Accepted alive Link to Nucleotide Sequence:NM_001319296.2Link to Protein Sequence:NP_001306225.1Re-query CCDS DB by Nucleotide ID:NM_001319296Re-query CCDS DB by Protein ID:NP_001306225Link to BLAST:NP_001306225.1
Original member Current member NCBI NM_001319297.2 NP_001306226.1 Accepted alive Link to Nucleotide Sequence:NM_001319297.2Link to Protein Sequence:NP_001306226.1Re-query CCDS DB by Nucleotide ID:NM_001319297Re-query CCDS DB by Protein ID:NP_001306226Link to BLAST:NP_001306226.1
Original member Current member NCBI NM_024095.5 NP_077000.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024095.5Link to Protein Sequence:NP_077000.1Re-query CCDS DB by Nucleotide ID:NM_024095Re-query CCDS DB by Protein ID:NP_077000Link to BLAST:NP_077000.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001306225.1 288 Q9H765 288 100% 0 0
NP_001306226.1 288 Q9H765 288 100% 0 0
NP_077000.1 288 Q9H765 288 100% 0 0

Chromosomal Locations for CCDS 8761.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 48149366 48149998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48151201 48151305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 48153368 48153496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGAGTTCCAGTATGTGGTATATTATGCAGAGCATTCAGAGCAAATACTCTCTCTCCGAGCGCTTAATCC
GAACAATTGCTGCCATCCGTTCCTTCCCACATGATAATGTAGAGGACCTCATCAGAGGGGGAGCAGATGT
GAACTGCACTCATGGCACACTGAAGCCCTTGCACTGTGCCTGTATGGTGTCAGATGCTGACTGTGTGGAG
TTACTTCTGGAAAAAGGAGCCGAGGTGAATGCCCTGGATGGGTATAACCGAACAGCCCTCCACTATGCAG
CAGAGAAAGATGAGGCTTGTGTGGAGGTCCTATTGGAGTATGGTGCAAACCCCAATGCTTTGGATGGCAA
CAGAGATACCCCACTTCACTGGGCAGCCTTTAAGAACAATGCTGAGTGTGTGCGGGCTCTCCTAGAGAGC
GGGGCCTCTGTCAATGCCCTGGATTACAACAATGATACACCGCTCAGCTGGGCTGCCATGAAGGGAAATC
TTGAGAGTGTCAGCATCCTTCTGGATTATGGCGCAGAGGTCAGAGTCATCAACCTAATAGGCCAGACACC
CATCTCCCGCCTGGTGGCTCTGCTAGTCAGGGGACTTGGAACAGAGAAAGAGGACTCTTGCTTTGAGCTC
CTCCACAGAGCTGTTGGACACTTTGAATTGAGGAAAAATGGCACCATGCCACGAGAGGTGGCCAGAGACC
CGCAGCTATGTGAAAAACTGACTGTTCTGTGCTCAGCTCCAGGAACTCTAAAAACACTCGCTCGCTATGC
CGTGCGCCGTAGCCTGGGACTCCAGTATCTCCCCGATGCAGTGAAGGGCCTTCCACTGCCAGCTTCTTTG
AAGGAATACCTGTTACTTTTAGAATAG

Translation (288 aa):
MSSSMWYIMQSIQSKYSLSERLIRTIAAIRSFPHDNVEDLIRGGADVNCTHGTLKPLHCACMVSDADCVE
LLLEKGAEVNALDGYNRTALHYAAEKDEACVEVLLEYGANPNALDGNRDTPLHWAAFKNNAECVRALLES
GASVNALDYNNDTPLSWAAMKGNLESVSILLDYGAEVRVINLIGQTPISRLVALLVRGLGTEKEDSCFEL
LHRAVGHFELRKNGTMPREVARDPQLCEKLTVLCSAPGTLKTLARYAVRRSLGLQYLPDAVKGLPLPASL
KEYLLLLE


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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