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Report for CCDS10144.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10144.1 Public Homo sapiens 15 TMOD2 24 110 108 CCDS HistoryNCBI Gene:29767Re-query CCDS DB by CCDS ID:10144.1Re-query CCDS DB by GeneID:29767See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10144.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000249700.9 ENSP00000249700.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000249700.9Link to Ensembl Protein Viewer:ENSP00000249700.4Re-query CCDS DB by Nucleotide ID:ENST00000249700Re-query CCDS DB by Protein ID:ENSP00000249700
Original member Current member NCBI NM_014548.4 NP_055363.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014548.4Link to Protein Sequence:NP_055363.1Re-query CCDS DB by Nucleotide ID:NM_014548Re-query CCDS DB by Protein ID:NP_055363Link to BLAST:NP_055363.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055363.1 351 Q9NZR1-1 351 100% 0 0

Chromosomal Locations for CCDS 10144.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 15 (NC_000015.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 51766442 51766567 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51768262 51768418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51773712 51773834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51776932 51777018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51781044 51781174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51782721 51782828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51798197 51798340 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51806377 51806521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 51808420 51808454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1056 nt):
ATGGCACTCCCCTTTCAAAAAGAGCTGGAGAAATACAAGAACATTGATGAAGATGAGCTTCTTGGCAAAC
TCTCAGAAGAGGAACTGAAACAGTTGGAAAATGTTCTAGATGACCTAGATCCTGAGAGTGCCATGCTGCC
AGCTGGATTTCGACAGAAAGACCAGACACAGAAGGCAGCCACCGGCCCCTTTGACCGCGAGCACCTCCTC
ATGTACCTGGAGAAGGAGGCTTTGGAACAGAAAGACAGAGAGGACTTTGTGCCCTTCACTGGAGAAAAGA
AAGGGAGAGTCTTTATCCCTAAAGAAAAGCCTATAGAAACTCGTAAAGAAGAAAAAGTGACCCTTGACCC
AGAACTGGAAGAAGCTTTGGCCAGTGCCTCTGACACCGAACTCTATGATCTTGCAGCTGTCCTTGGAGTA
CACAATTTGCTCAACAATCCAAAGTTCGATGAAGAAACAGCCAACAATAAAGGTGGCAAAGGACCTGTCA
GAAATGTTGTCAAAGGTGAAAAAGTAAAGCCAGTATTTGAGGAACCACCAAATCCCACAAATGTGGAAAT
AAGCCTGCAGCAGATGAAAGCCAATGATCCTAGCTTGCAAGAAGTCAACCTCAACAACATTAAGAACATT
CCAATTCCAACCCTGAGGGAATTTGCAAAGGCTCTGGAGACCAACACTCACGTGAAGAAGTTCAGCCTGG
CCGCAACTCGCAGCAATGACCCTGTGGCCATTGCTTTTGCAGACATGCTGAAAGTAAACAAGACCTTGAC
AAGTCTAAACATAGAATCCAATTTTATCACTGGAACTGGGATCCTGGCCCTGGTAGAGGCACTGAAAGAA
AATGACACCTTGACAGAAATCAAGATTGACAACCAGAGGCAGCAGTTGGGAACAGCTGTAGAGATGGAAA
TTGCCCAGATGCTGGAGGAGAATTCAAGGATCCTCAAGTTTGGATACCAGTTTACCAAGCAAGGGCCACG
AACAAGGGTGGCAGCTGCCATCACAAAGAATAATGACCTGGTTCGTAAGAAGAGAGTTGAAGCAGACCGA
AGGTAA

Translation (351 aa):
MALPFQKELEKYKNIDEDELLGKLSEEELKQLENVLDDLDPESAMLPAGFRQKDQTQKAATGPFDREHLL
MYLEKEALEQKDREDFVPFTGEKKGRVFIPKEKPIETRKEEKVTLDPELEEALASASDTELYDLAAVLGV
HNLLNNPKFDEETANNKGGKGPVRNVVKGEKVKPVFEEPPNPTNVEISLQQMKANDPSLQEVNLNNIKNI
PIPTLREFAKALETNTHVKKFSLAATRSNDPVAIAFADMLKVNKTLTSLNIESNFITGTGILALVEALKE
NDTLTEIKIDNQRQQLGTAVEMEIAQMLEENSRILKFGYQFTKQGPRTRVAAAITKNNDLVRKKRVEADR
R


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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