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Report for CCDS46418.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46418.1 Public Homo sapiens 2 NCKAP5 24 110 108 CCDS HistoryNCBI Gene:344148Re-query CCDS DB by CCDS ID:46418.1Re-query CCDS DB by GeneID:344148See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46418.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000409261.6 ENSP00000387128.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000409261.6Link to Ensembl Protein Viewer:ENSP00000387128.1Re-query CCDS DB by Nucleotide ID:ENST00000409261Re-query CCDS DB by Protein ID:ENSP00000387128
Original member Current member NCBI NM_207363.3 NP_997246.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207363.3Link to Protein Sequence:NP_997246.2Re-query CCDS DB by Nucleotide ID:NM_207363Re-query CCDS DB by Protein ID:NP_997246Link to BLAST:NP_997246.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997246.2 1909 O14513-1 1909 100% 0 0

Chromosomal Locations for CCDS 46418.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 132673289 132673305 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132725627 132725759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132728816 132728952 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132731737 132732051 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132773816 132773894 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132781052 132781229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132781940 132785718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132790023 132790205 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132796628 132796729 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132860492 132860611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132868936 132868974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132878848 132878916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132963720 132963869 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 132994152 132994239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 133129978 133130111 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 133213716 133213779 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 133303037 133303110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 133517458 133517526 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5730 nt):
ATGGAGGGAAAGAGACAGCTTGAGAAAAGGGACTTTGGAAAAAGGCTGTCTCTAGACAGCAGTCTTGTGG
AATACATGGACTCCAATAAATACATTGAGCATCTGCTGACTCAGCTTGAGGAGCAACACAGGAGTCTCTG
GAGGGAGAAGTTGGCAGTGGCCCGACTACAGCGAGAAGTTGCCCAAAGAACAAGTGAGGGGGCCATGCAT
GAGAAGCTGATACATGAACTGGAAGAGGAGAGACACTTACGTCTTCAAAGCGAGAAGCGGTTGCAGGAGG
TGACCCTAGAGTCTGAACGCAACAGAATTCAGATGCGTAGCTTGCAGCAGCAGTTCTCCAGGATGGAAGA
AACAGTACGAAATCTATTGCAGAGTCAAGGATCTCCAGAGCAGAAAAAAGAAGAAACTGTTAATATAATG
GTCTATCAGGAAAAGCTGTCAGAGGAAGAGAGAAAACATAAGGAAGCTTTGGAAGATCTTCACATGGTGG
TTGATGAGGATTCGAGGAGTGAAAGCAGCAGTACAGATGAGGGAAAAGAAAAGACCAAATTGCTATTAGA
GAGATTGAAAGCTCTAGAGGCAGAGAATTCAGCGTTGGCTTTGGAGAATGAAAATCAAAGGGAACAATAT
GAGCGATGTCTTGATGAGGTAGCCAACCAAGTTGTTCAAGCTCTGCTTACTCAAAAGGATCTAAGAGAGG
AATGTGTGAAGTTGAAAACAAGAGTGTTTGATTTGGAACAGCAGAATCGAACACTAAGCATCCTATTCCA
ACAGCGAGTCAGACCCACTTCTGATCTGCTCCTCCAGAAACTTCACTCACGTCTCTTGGATCTTTCATCT
GGAGATTTGCTTTCAGAGGTGGAAAGAAACCGAAGTCTGACACAGTCACGAACTGATGCTGAGGTGCACG
AACACCAACTAAATACAAAATCGGCCTTGAAATGCCCTGGCTTGGGGGCTGTCATCCCTGGTCATCTCTG
TCCTCGAAACAGCTACAGTAGCAGCAGTGAACTGTCTCTTTCAAGCACCTGCAGCGAGTACTCCAGTGGC
TCCTCCTACACGTGGCACGATGGGAAGAACCTCAGGAAAAGGCAATCATCACAAAACTGGGATAAAAGGC
TAAGTATTGATTCTTCGCTCCCAAGTGGCTTTGCTAGTCCTACAAATGAACTACCTCCAACTCGTATCAA
GGAAAGCCACATTTTGGAAGGGCTAAGAAAGCTACAGAAGCGAAAAGTGTTACTTGAACCCCCATCAGTG
ATAACCAAATGGGGTTATAAAGATTGCATGAACTCGAATGAAGGAATATATTCTCCTGGAATTAAAAGTA
GCAGCCTCAAGGAGTATCCCCCCTGCAAAACAGCTGACCTGGGGAGCCCCTGCAAGGAACCCCACAAGAC
ATTTGTTTATGATCTAGATTCCCACGTTGATGCGGACGATGACCCTTCCACCTTAGCATTGCTCCAAGCA
GTTCCAAACCAGAGCTGCAGGCCACATGGCAGTAAATTAACCCACAGTGTTTCCGACAGTCTGTTTGGCT
GGGAGACAAACAGAAAACACTTTCTGGAAGGCACATCCTCAGTTTATCCCAAGGAAAGGCCTGAAAAGCT
GACAAGTTGCGCCAGCAGCTGTCCCTTAGAGATGAAGCTGTGCCCAAGTGTGCAGACGCCTCAGGTACAG
AGGGAGAGGGGCCCACAGGGCCAAGGCCATGGCCGCATGGCTCTCAACCTCCAGCTTTCAGACACTGATG
ACAATGAAACGTTTGATGAGCTGCACATAGAGAGCAGTGATGAGAAAAGTCCTTCAGACGTGTCATTGGC
TGCCGACACCGATAAGTCCGTGGAGAACCTGGATGTCCTTGTGGGGTTTGGAAAATCTCTATGTGGGTCT
CCTGAAGAGGAGGAAAAACAAGTGCCCATCCCTTCAGAGACTAGGCCAAAGACTTTTAGTTTCATTAAGC
AGCAAAGAGTTGTAAAAAGGACTTCTTCAGAAGAATGTGTGACTGTGATATTTGATGCGGAAGACGGTGA
GCCCATTGAATTCAGCTCTCACCAGACTGGGGTTGTCACTGTTACCAGAAATGAGATTTCCATCAATTCA
ACTCCTGCTGGACCCAAGGCAGAACATACTGAGCTTTTACCTCAGGGAATTGCTTGTTTACAGCCAAGAG
CTGCTGCAAGAGACTATACTTTCTTTAAAAGGTCTGAAGAGGACACTGAGAAAAACATTCCAAAAGATAA
TGTAGATAATGTTCCCAGGGTGTCCACTGAATCTTTCAGCTCCAGGACAGTGACACAAAATCCTCAGCAG
CAAAAGCTGGTCAAACCAACACACAATATATCATGCCAGAGTAATTCCAGGTCTTCGGCACCCATGGGCA
TCTATCAAAAGCAAAATCTGACAAAAATACCTCCCAGGGGCAAGTCTTCACCTCAGAAATCAAAACTAAT
GGAGCCCGAAGCCACCACACTACTCCCTTCATCTGGCCTGGTGACTCTTGAAAAATCACCAGCCTTAGCT
CCTGGGAAACTCTCACGATTCATGAAGACTGAGAGCTCAGGGCCCCTCTTTGAATTACGATCAGATCCAC
ACATTCCAAAACATTCCGCCCAACTTCCGCACAGCTCCAGGATGCCCAGCAGGAGGGACTGGGTCCAGTG
CCCCAAGAGTCAGACTCCAGGGTCACGGTCAAGGCCTGCCATTGAGTCTAGTGACAGTGGAGAGCCCCCC
ACGAGGGATGAACACTGTGGCTCTGGGCCGGAGGCAGGGGTGAAATCCCCTTCCCCTCCGCCCCCTCCAG
GCAGGTCCGTCTCCCTGCTGGCCAGGCCCAGCTATGACTATTCACCAGCACCTTCATCCACCAAGTCCGA
AACCAGGGTCCCCAGTGAAACAGCAAGGACCCCATTCAAATCCCCGCTGCTGAAAGGAATTTCTGCTCCA
GTTATTTCTTCTAATCCGGCCACGACAGAAGTGCAGAGGAAGAAACCTTCTGTGGCCTTCAAAAAGCCTA
TCTTCACTCACCCTATGCCCTCCCCAGAAGCAGTCATTCAAACCCGATGCCCTGCTCATGCCCCCTCCAG
CTCCTTCACCGTAATGGCTCTGGGGCCTCCAAAGGTCTCTCCGAAGAGAGGTGTCCCCAAAACCTCTCCT
CGCCAAACACTTGGGACCCCACAAAGGGACATAGGATTACAGACTCCCAGGATCTCTCCTTCAACCCATG
AGCCACTGGAAATGACGTCCTCCAAAAGTGTATCTCCAGGGAGAAAAGGACAATTGAATGATAGCGCCTC
CACACCCCCCAAGCCTTCCTTCTTAGGGGTAAATGAGTCACCATCATCTCAGGTCAGCAGTTCCTCATCA
TCCTCATCACCCGCCAAAAGCCATAACAGCCCTCATGGTTGTCAAAGTGCTCATGAGAAAGGACTGAAAA
CTCGCCTTCCAGTGGGACTCAAAGTGCTCATGAAGTCTCCCCAGCTGCTCAGGAAAAGTTCCACCGTGCC
AGGGAAACATGAAAAAGACAGTTTAAATGAAGCCTCCAAAAGTTCCGTGGCTGTGAACAAGTCTAAGCCA
GAGGACTCCAAGAATCCAGCAAGCATGGAGATCACAGCGGGTGAAAGAAATGTGACCCTACCGGATTCAC
AAGCACAGGGCAGTTTAGCTGATGGGCTTCCCCTGGAAACAGCACTACAAGAGCCATTGGAAAGTAGCAT
CCCTGGGAGTGATGGAAGGGATGGGGTAGATAATAGATCCATGAGAAGATCCCTTTCCTCCAGCAAACCA
CACCTAAAACCAGCTCTGGGTATGAATGGCGCCAAAGCCCGCAGCCACAGCTTCAGTACACACTCAGGAG
ACAAGCCTTCTACGCCCCCCATCGAAGGGTCAGGCAAAGTCCGCACTCAGATCATTACCAATACCGCCGA
GAGAGGCAATTCTCTTACCCGGCAGAACTCTTCCACGGAAAGCTCTCCCAACAAGGCCCCTTCTGCTCCC
ATGTTGGAGAGTCTCCCCAGTGTTGGGAGGCCCTCGGGGCACCCCTCCTCCGGGAAGGGCTCCCTGGGGA
GCTCAGGCAGCTTCAGCAGTCAGCATGGGAGCCCAAGTAAGTTGCCTTTGAGGATCCCTCCAAAGTCTGA
GGGACTCCTCATCCCACCTGGAAAGGAAGACCAGCAGGCCTTCACCCAGGGAGAGTGCCCCAGTGCCAAT
GTGGCTGTACTTGGGGAACCAGGCAGTGACCGCCGCAGTTGCCCACCCACCCCAACAGACTGCCCTGAAG
CCCTGCAGAGCCCAGGGAGGACTCAGCATCCAAGCACTTTTGAAACAAGCAGTACATCCAAGCTAGAAAC
TTCTGGAAGGCATCCAGATGCCTCTGCAACCGCGACTGATGCTGTGAGTTCAGAAGCCCCCCTCTCACCC
ACAATCGAAGAAAAGGTCATGTTGTGCATTCAGGAAAATGTGGAAAAGGGCCAAGTGCAAACAAAGCCCA
CCTCTGTGGAAGCAAAGCAGAAGCCTGGGCCTTCTTTTGCCAGCTGGTTTGGTTTTCGGAAGAGTAGACT
TCCAGCTCTGAGTAGCAGGAAAATGGACATCTCCAAAACCAAAGTAGAAAAGAAAGATGCAAAAGTCTTG
GGGTTTGGAAACAGACAACTAAAATCAGAAAGAAAAAAAGAGAAAAAGAAGCCTGAACTACAGTGTGAGA
CAGAAAATGAGCTTATCAAGGACACCAAGTCAGCAGATAATCCAGATGGCGGTTTACAAAGCAAAAATAA
TCGGAGAACACCACAAGACATTTACAACCAACTGAAGATTGAACCAAGGAATAGACACAGCCCTGTTGCA
TGTTCAACGAAAGACACCTTCATGACGGAACTCTTGAACAGAGTTGATAAGAAAGCAGCTCCACAGACAG
AAAGTGGATCAAGTAATGCTTCCTGCAGGAATGTGTTAAAGGGCAGTTCTCAGGGCTCCTGTCTCATCGG
CAGCTCTATCAGTACTCAAGGAAACCACAAGAAAAACATGAAAATCAAAGCCGATATGGAAGTACCAAAA
GACTCCCTGGTAAAAGAGGCAAATGAAAACTTGCAAGAGGATGAAGACGATGCAGTTGCAGATTCTGTAT
TTCAGAGCCACATCATAGAATCCAACTGCCAGATGAGAACATTGGACAGTGGGATCGGAACCTTTCCACT
CCCAGACTCGGGAAATCGCTCGACAGGACGCTACCTATGCCAGCCAGACTCCCCAGAGGACGCTGAGCCT
CTCCTGCCTCTCCAGTCAGCCCTTTCTGCAGTTTCTTCCATGAGAGCCCAAACCCTTGAACGTGAAGTGC
CTTCCTCCACAGACGGCCAGCGCCCTGCAGATAGCGCCATTGTTCATTCCACATCCGACCCCATCATGAC
CGCCAGAGGGATGAGGCCTCTTCAGAGCCGCCTCCCCAAACCAGCTTCCTCAGGAAAAGTCAGTTCCCAA
AAGCAGAATGAAGCAGAGCCAAGGCCTCAGACATGCTCATCATTCGGATATGCTGAAGACCCAATGGCAA
GCCAGCCGCTTCCAGACTGGGGGAGTGAAGTTGCTGCCACCGGGACCCAGGACAAGGCACCCAGAATGTG
TACGTACTCTGCCAGCGGTGGCAGTAATAGTGACAGTGACCTGGACTATGGAGATAATGGTTTTGGAGCT
GGAAGGGGACAGTTAGTGAAAGCACTGAAGAGCGCTGCCCCAGAAATTGAGACAACTTGA

Translation (1909 aa):
MEGKRQLEKRDFGKRLSLDSSLVEYMDSNKYIEHLLTQLEEQHRSLWREKLAVARLQREVAQRTSEGAMH
EKLIHELEEERHLRLQSEKRLQEVTLESERNRIQMRSLQQQFSRMEETVRNLLQSQGSPEQKKEETVNIM
VYQEKLSEEERKHKEALEDLHMVVDEDSRSESSSTDEGKEKTKLLLERLKALEAENSALALENENQREQY
ERCLDEVANQVVQALLTQKDLREECVKLKTRVFDLEQQNRTLSILFQQRVRPTSDLLLQKLHSRLLDLSS
GDLLSEVERNRSLTQSRTDAEVHEHQLNTKSALKCPGLGAVIPGHLCPRNSYSSSSELSLSSTCSEYSSG
SSYTWHDGKNLRKRQSSQNWDKRLSIDSSLPSGFASPTNELPPTRIKESHILEGLRKLQKRKVLLEPPSV
ITKWGYKDCMNSNEGIYSPGIKSSSLKEYPPCKTADLGSPCKEPHKTFVYDLDSHVDADDDPSTLALLQA
VPNQSCRPHGSKLTHSVSDSLFGWETNRKHFLEGTSSVYPKERPEKLTSCASSCPLEMKLCPSVQTPQVQ
RERGPQGQGHGRMALNLQLSDTDDNETFDELHIESSDEKSPSDVSLAADTDKSVENLDVLVGFGKSLCGS
PEEEEKQVPIPSETRPKTFSFIKQQRVVKRTSSEECVTVIFDAEDGEPIEFSSHQTGVVTVTRNEISINS
TPAGPKAEHTELLPQGIACLQPRAAARDYTFFKRSEEDTEKNIPKDNVDNVPRVSTESFSSRTVTQNPQQ
QKLVKPTHNISCQSNSRSSAPMGIYQKQNLTKIPPRGKSSPQKSKLMEPEATTLLPSSGLVTLEKSPALA
PGKLSRFMKTESSGPLFELRSDPHIPKHSAQLPHSSRMPSRRDWVQCPKSQTPGSRSRPAIESSDSGEPP
TRDEHCGSGPEAGVKSPSPPPPPGRSVSLLARPSYDYSPAPSSTKSETRVPSETARTPFKSPLLKGISAP
VISSNPATTEVQRKKPSVAFKKPIFTHPMPSPEAVIQTRCPAHAPSSSFTVMALGPPKVSPKRGVPKTSP
RQTLGTPQRDIGLQTPRISPSTHEPLEMTSSKSVSPGRKGQLNDSASTPPKPSFLGVNESPSSQVSSSSS
SSSPAKSHNSPHGCQSAHEKGLKTRLPVGLKVLMKSPQLLRKSSTVPGKHEKDSLNEASKSSVAVNKSKP
EDSKNPASMEITAGERNVTLPDSQAQGSLADGLPLETALQEPLESSIPGSDGRDGVDNRSMRRSLSSSKP
HLKPALGMNGAKARSHSFSTHSGDKPSTPPIEGSGKVRTQIITNTAERGNSLTRQNSSTESSPNKAPSAP
MLESLPSVGRPSGHPSSGKGSLGSSGSFSSQHGSPSKLPLRIPPKSEGLLIPPGKEDQQAFTQGECPSAN
VAVLGEPGSDRRSCPPTPTDCPEALQSPGRTQHPSTFETSSTSKLETSGRHPDASATATDAVSSEAPLSP
TIEEKVMLCIQENVEKGQVQTKPTSVEAKQKPGPSFASWFGFRKSRLPALSSRKMDISKTKVEKKDAKVL
GFGNRQLKSERKKEKKKPELQCETENELIKDTKSADNPDGGLQSKNNRRTPQDIYNQLKIEPRNRHSPVA
CSTKDTFMTELLNRVDKKAAPQTESGSSNASCRNVLKGSSQGSCLIGSSISTQGNHKKNMKIKADMEVPK
DSLVKEANENLQEDEDDAVADSVFQSHIIESNCQMRTLDSGIGTFPLPDSGNRSTGRYLCQPDSPEDAEP
LLPLQSALSAVSSMRAQTLEREVPSSTDGQRPADSAIVHSTSDPIMTARGMRPLQSRLPKPASSGKVSSQ
KQNEAEPRPQTCSSFGYAEDPMASQPLPDWGSEVAATGTQDKAPRMCTYSASGGSNSDSDLDYGDNGFGA
GRGQLVKALKSAAPEIETT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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