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Report for CCDS7454.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7454.2 Public Homo sapiens 10 ARHGAP19 24 110 108 CCDS HistoryNCBI Gene:84986Re-query CCDS DB by CCDS ID:7454.2Re-query CCDS DB by GeneID:84986See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 7454.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000358531.9 ENSP00000351333.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000358531.9Link to Ensembl Protein Viewer:ENSP00000351333.4Re-query CCDS DB by Nucleotide ID:ENST00000358531Re-query CCDS DB by Protein ID:ENSP00000351333
Original member Current member NCBI NM_032900.6 NP_116289.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032900.6Link to Protein Sequence:NP_116289.4Re-query CCDS DB by Nucleotide ID:NM_032900Re-query CCDS DB by Protein ID:NP_116289Link to BLAST:NP_116289.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_116289.4 494 Q14CB8-1 494 100% 0 0

Chromosomal Locations for CCDS 7454.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 97226122 97226132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97229147 97229225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97229764 97229874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97235217 97235315 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97243968 97244159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97246272 97246337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97256318 97256404 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97259402 97259628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97263420 97263629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97264826 97264906 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97265860 97266125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 97292572 97292627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1485 nt):
ATGGCGACTGAGGCACAGAGTGAAGGGGAGGTGCCAGCCCGCGAATCCGGCCGGAGTGATGCCATCTGCA
GTTTTGTGATCTGCAATGATTCTTCCCTTCGAGGTCAGCCCATTATCTTTAATCCTGACTTTTTTGTGGA
GAAACTCCGACATGAGAAACCTGAGATTTTCACTGAGTTGGTGGTCAGCAATATCACAAGGCTCATCGAT
TTACCTGGAACTGAGTTGGCTCAGCTGATGGGGGAAGTGGACCTTAAGTTGCCTGGCGGGGCTGGCCCAG
CATCAGGATTCTTCCGGTCTCTCATGTCTCTCAAGCGAAAGGAAAAAGGAGTGATATTTGGGTCCCCACT
GACGGAGGAAGGCATTGCCCAGATATACCAACTGATTGAGTATCTACACAAAAACTTGCGAGTAGAGGGT
TTGTTTAGAGTACCGGGTAATAGTGTCCGACAGCAGATTTTAAGGGATGCTCTCAATAATGGAACTGACA
TTGACTTGGAATCAGGGGAATTTCACTCAAATGATGTTGCCACTTTGCTGAAGATGTTTCTAGGAGAGTT
GCCGGAGCCTCTGCTGACACATAAACACTTCAATGCACACCTCAAAATCGCTGATTTGATGCAGTTTGAT
GATAAAGGAAACAAGACCAATATACCAGACAAGGACCGGCAAATTGAGGCTCTCCAGTTGCTCTTCCTCA
TTCTCCCTCCTCCTAATCGTAATTTGCTGAAGTTATTGCTTGATCTCCTATACCAGACAGCAAAGAAACA
AGACAAGAACAAGATGTCAGCCTATAACCTTGCCCTTATGTTTGCACCCCATGTCCTGTGGCCAAAAAAT
GTCACTGCAAATGACCTTCAGGAGAATATCACAAAGTTAAACAGTGGGATGGCTTTTATGATTAAACACT
CCCAGAAACTTTTTAAGGCTCCTGCTTACATTCGGGAGTGTGCGAGATTGCACTATTTGGGATCCAGAAC
TCAGGCATCAAAGGATGACCTTGACCTCATAGCTTCATGTCATACTAAGTCCTTTCAGCTGGCAAAGTCT
CAGAAACGGAACCGGGTAGATTCCTGCCCTCACCAGGAGGAGACCCAGCACCATACGGAAGAGGCACTGA
GAGAGCTGTTTCAACACGTTCATGATATGCCAGAGTCAGCAAAGAAGAAACAACTTATTAGACAGTTTAA
TAAGCAATCATTGACCCAGACACCAGGGCGAGAACCTTCTACTTCCCAGGTACAAAAGAGGGCTCGTTCG
CGCTCCTTCAGTGGGCTTATTAAGCGGAAGGTCCTGGGAAATCAGATGATGTCAGAAAAGAAAAAGAAGA
ACCCTACTCCAGAATCTGTGGCCATTGGTGAATTGAAGGGAACCAGCAAAGAAAATAGGAACTTATTATT
TTCTGGCTCTCCAGCTGTCACGATGACACCAACAAGATTGAAGTGGTCTGAAGGGAAGAAAGAGGGGAAA
AAAGGATTTCTCTGA

Translation (494 aa):
MATEAQSEGEVPARESGRSDAICSFVICNDSSLRGQPIIFNPDFFVEKLRHEKPEIFTELVVSNITRLID
LPGTELAQLMGEVDLKLPGGAGPASGFFRSLMSLKRKEKGVIFGSPLTEEGIAQIYQLIEYLHKNLRVEG
LFRVPGNSVRQQILRDALNNGTDIDLESGEFHSNDVATLLKMFLGELPEPLLTHKHFNAHLKIADLMQFD
DKGNKTNIPDKDRQIEALQLLFLILPPPNRNLLKLLLDLLYQTAKKQDKNKMSAYNLALMFAPHVLWPKN
VTANDLQENITKLNSGMAFMIKHSQKLFKAPAYIRECARLHYLGSRTQASKDDLDLIASCHTKSFQLAKS
QKRNRVDSCPHQEETQHHTEEALRELFQHVHDMPESAKKKQLIRQFNKQSLTQTPGREPSTSQVQKRARS
RSFSGLIKRKVLGNQMMSEKKKKNPTPESVAIGELKGTSKENRNLLFSGSPAVTMTPTRLKWSEGKKEGK
KGFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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