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Report for CCDS13327.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13327.1 Public Homo sapiens 20 OSER1 24 110 108 CCDS HistoryNCBI Gene:51526Re-query CCDS DB by CCDS ID:13327.1Re-query CCDS DB by GeneID:51526See the combined annotation on chromosome 20 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13327.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000255174.3 ENSP00000255174.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000255174.3Link to Ensembl Protein Viewer:ENSP00000255174.2Re-query CCDS DB by Nucleotide ID:ENST00000255174Re-query CCDS DB by Protein ID:ENSP00000255174
Original member Current member EBI ENST00000372970.6 ENSP00000362061.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000372970.6Link to Ensembl Protein Viewer:ENSP00000362061.1Re-query CCDS DB by Nucleotide ID:ENST00000372970Re-query CCDS DB by Protein ID:ENSP00000362061
Original member Current member NCBI NM_016470.8 NP_057554.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016470.8Link to Protein Sequence:NP_057554.4Re-query CCDS DB by Nucleotide ID:NM_016470Re-query CCDS DB by Protein ID:NP_057554Link to BLAST:NP_057554.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057554.4 292 Q9NX31 292 100% 0 0

Chromosomal Locations for CCDS 13327.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 20 (NC_000020.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20See the combined annotation on chromosome 20 in Sequence Viewer

Chromosome Start Stop Links
20 44197052 44197739 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 44202961 44203074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20
20 44206881 44206957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 20Link to Ensembl Genome Browser on chromosome 20

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (879 nt):
ATGAAATCCGAAGCCAAGGATGGAGAGGAGGAGAGTCTACAGACTGCTTTCAAAAAATTAAGAGTGGATG
CATCAGGGTCTGTAGCATCTCTGTCTGTTGGAGAAGGCACAGGTGTCAGAGCACCAGTCAGAACAGCAAC
AGATGATACCAAACCTAAAACCACATGTGCATCTAAAGACAGTTGGCACGGGTCTACAAGGAAGTCTTCA
CGAGGAGCAGTGAGAACTCAGCGTCGTCGACGTTCTAAGTCTCCTGTCCTTCATCCTCCAAAGTTTATAC
ATTGCAGTACAATAGCGTCTTCTTCCAGCAGTCAACTCAAGCACAAAAGCCAGACTGACTCACCTGATGG
CAGCAGTGGGCTGGGAATTTCATCCCCTAAAGAGTTCAGTGCAGGAGAAAGCTCTACTTCTCTCGATGCT
AATCACACAGGGGCAGTCGTTGAGCCTTTGAGAACTTCTGTTCCAAGGCTCCCATCAGAGAGTAAGAAGG
AAGACTCCTCTGACGCTACCCAAGTCCCCCAAGCAAGTCTCAAAGCCAGTGATCTCTCTGACTTTCAATC
AGTTTCCAAGCTAAACCAGGGCAAGCCATGCACATGCATAGGCAAGGAATGCCAGTGTAAGAGATGGCAT
GATATGGAAGTGTATTCCTTTTCAGGCCTGCAGAGTGTCCCTCCCTTGGCTCCAGAACGAAGATCCACAC
TTGAGGACTACTCTCAGTCGCTGCACGCCAGAACTCTGTCTGGCTCTCCCCGATCCTGTTCTGAGCAAGC
TCGAGTCTTCGTGGATGATGTGACCATTGAGGACCTGTCAGGCTACATGGAGTATTACTTGTATATTCCC
AAGAAAATGTCCCACATGGCAGAAATGATGTACACCTGA

Translation (292 aa):
MKSEAKDGEEESLQTAFKKLRVDASGSVASLSVGEGTGVRAPVRTATDDTKPKTTCASKDSWHGSTRKSS
RGAVRTQRRRRSKSPVLHPPKFIHCSTIASSSSSQLKHKSQTDSPDGSSGLGISSPKEFSAGESSTSLDA
NHTGAVVEPLRTSVPRLPSESKKEDSSDATQVPQASLKASDLSDFQSVSKLNQGKPCTCIGKECQCKRWH
DMEVYSFSGLQSVPPLAPERRSTLEDYSQSLHARTLSGSPRSCSEQARVFVDDVTIEDLSGYMEYYLYIP
KKMSHMAEMMYT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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