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Report for CCDS33698.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33698.1 Public Homo sapiens 3 TATDN2 24 110 108 CCDS HistoryNCBI Gene:9797Re-query CCDS DB by CCDS ID:33698.1Re-query CCDS DB by GeneID:9797See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33698.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000287652.8 ENSP00000287652.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000287652.8Link to Ensembl Protein Viewer:ENSP00000287652.4Re-query CCDS DB by Nucleotide ID:ENST00000287652Re-query CCDS DB by Protein ID:ENSP00000287652
Original member Current member EBI ENST00000448281.7 ENSP00000408736.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000448281.7Link to Ensembl Protein Viewer:ENSP00000408736.2Re-query CCDS DB by Nucleotide ID:ENST00000448281Re-query CCDS DB by Protein ID:ENSP00000408736
Original member Current member NCBI NM_014760.4 NP_055575.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014760.4Link to Protein Sequence:NP_055575.3Re-query CCDS DB by Nucleotide ID:NM_014760Re-query CCDS DB by Protein ID:NP_055575Link to BLAST:NP_055575.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055575.3 761 Q93075 761 100% 0 0

Chromosomal Locations for CCDS 33698.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 10249201 10249614 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 10260137 10260670 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 10270131 10271015 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 10276361 10276488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 10278279 10278462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 10278885 10279025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2286 nt):
ATGGCGTCCGAGCGGGGCAAGGTCAAGCACAACTGGAGCAGCACGTCGGAAGGGTGTCCCCGCAAGCGCA
GCTGCCTCCGGGAGCCCTGTGATGTGGCCCCCTCCAGCCGGCCAGCTCAGAGGTCTGCGTCGCGTTCTGG
AGGGCCCAGCAGCCCCAAGCGCCTGAAAGCCCAGAAGGAGGACGATGTGGCTTGCTCGCGGAGGTTATCC
TGGGGCTCATCCCGCCGCAGAAATAACTCCTCCTCCTCCTTCTCCCCACATTTCTTGGGCCCTGGTGTGG
GCGGGGCCGCCTCCAAAGGCTGCCTGATTCGGAACACTCGGGGGTTCCTGTCTTCAGGGGGATCCCCTCT
GCGTCCTGCCAACGCCTCTTTGGAAGAAATGGCTTCTCTAGAGGAGGAAGCCTGCAGCCTTAAGGTTGAT
TCCAAAGATAGTTCTCATAACTCCACAAACTCTGAATTTGCAGCTGAAGCTGAGGGTCAGAATGATACAA
TTGAGGAACCCAACAAGGTCCAGAAAAGGAAGAGGGATAGACTTCGAGACCAGGGCTCCACAATGATCTA
CCTGAAGGCTATCCAGGGCATCCTGGGGAAATCGATGCCAAAAAGGAAGGGAGAGGCTGCCACTCGGGCA
AAACCAAGCGCAGCAGAGCATCCCAGCCATGGAGAAGGACCAGCCAGGAGTGAAGGACCAGCCAAGACTG
CAGAAGGAGCAGCCAGGAGTGTCACAGTCACTGCTGCTCAGAAGGAGAAAGACGCAACCCCAGAGGTCAG
CATGGAGGAGGATAAGACAGTGCCAGAGAGGAGCAGCTTCTATGACAGGAGAGTAGTTATAGACCCTCAA
GAGAAACCCAGTGAGGAGCCCCTTGGGGACCGAAGGACTGTCATTGACAAATGCTCTCCACCCCTAGAGT
TCTTGGATGACTCTGACTCTCATTTAGAAATCCAAAAGCATAAAGATAGGGAGGTGGTGATGGAGCACCC
CTCTTCTGGAAGTGACTGGTCTGATGTTGAGGAGATCTCCACAGTCAGATTCTCTCAGGAGGAACCTGTC
TCCCTGAAACCTTCAGCCGTTCCGGAGCCTTCTTCCTTCACCACCGACTATGTCATGTACCCTCCTCATT
TGTACAGTAGTCCTTGGTGTGACTACGCCAGCTATTGGACCAGCAGCCCCAAGCCTTCTAGCTACCCCTC
CACAGGCAGCAGCAGCAACGATGCAGCCCAGGTTGGGAAGAGCAGCCGGAGCCGCATGAGTGATTATTCC
CCCAACTCTACAGGGAGTGTCCAAAACACCTCCAGAGACATGGAGGCCTCAGAGGAAGGCTGGTCCCAGA
ATTCTCGTTCATTTCGCTTCTCCAGAAGCTCAGAAGAAAGAGAGGTGAAGGAGAAAAGAACATTCCAAGA
GGAGATGCCTCCGCGTCCTTGTGGAGGACACGCATCCAGCTCCCTGCCAAAGAGCCACCTGGAGCCAAGC
CTAGAGGAGGGCTTCATTGACACTCATTGTCACCTGGACATGCTCTATTCCAAGCTATCTTTCCAAGGGA
CCTTTACAAAGTTCAGAAAAATTTACAGCAGCTCCTTCCCTAAGGAATTTCAGGGCTGCATCTCTGACTT
CTGTGATCCCCGCACCCTGACAGATTGCCTATGGGAGGAGCTGTTGAAAGAGGATCTGGTCTGGGGGGCC
TTTGGCTGTCACCCTCATTTTGCACGTTACTACAGTGAGAGTCAAGAAAGAAATCTTTTGCAAGCCTTAA
GGCACCCTAAGGCTGTGGCATTTGGAGAAATGGGCTTGGATTACTCTTACAAGTGCACCACGCCTGTCCC
AGAACAGCACAAGGTATTTGAGAGACAGCTGCAGCTGGCTGTGTCTCTAAAGAAGCCCTTGGTGATCCAC
TGCCGAGAAGCTGATGAAGATCTGCTAGAAATCATGAAAAAGTTTGTGCCCCCTGACTACAAGATCCATA
GGCATTGCTTCACCGGCAGCTACCCGGTCATTGAGCCCCTGCTGAAGTACTTTCCCAACATGTCTGTGGG
CTTCACGGCAGTGCTGACATACTCCTCTGCCTGGGAGGCCCGGGAAGCCTTGAGGCAGATCCCACTGGAG
AGAATCATCGTGGAAACGGATGCTCCCTATTTCCTCCCTCGCCAGGTTCCCAAAAGCCTTTGCCAGTATG
CCCACCCGGGCCTGGCCTTGCATACGGTCCGAGAGATTGCCAGAGTCAAAGATCAGCCACTCTCCCTCAC
CTTGGCTGCCTTGCGTGAGAACACCAGTCGCCTCTACAGTCTTTAA

Translation (761 aa):
MASERGKVKHNWSSTSEGCPRKRSCLREPCDVAPSSRPAQRSASRSGGPSSPKRLKAQKEDDVACSRRLS
WGSSRRRNNSSSSFSPHFLGPGVGGAASKGCLIRNTRGFLSSGGSPLRPANASLEEMASLEEEACSLKVD
SKDSSHNSTNSEFAAEAEGQNDTIEEPNKVQKRKRDRLRDQGSTMIYLKAIQGILGKSMPKRKGEAATRA
KPSAAEHPSHGEGPARSEGPAKTAEGAARSVTVTAAQKEKDATPEVSMEEDKTVPERSSFYDRRVVIDPQ
EKPSEEPLGDRRTVIDKCSPPLEFLDDSDSHLEIQKHKDREVVMEHPSSGSDWSDVEEISTVRFSQEEPV
SLKPSAVPEPSSFTTDYVMYPPHLYSSPWCDYASYWTSSPKPSSYPSTGSSSNDAAQVGKSSRSRMSDYS
PNSTGSVQNTSRDMEASEEGWSQNSRSFRFSRSSEEREVKEKRTFQEEMPPRPCGGHASSSLPKSHLEPS
LEEGFIDTHCHLDMLYSKLSFQGTFTKFRKIYSSSFPKEFQGCISDFCDPRTLTDCLWEELLKEDLVWGA
FGCHPHFARYYSESQERNLLQALRHPKAVAFGEMGLDYSYKCTTPVPEQHKVFERQLQLAVSLKKPLVIH
CREADEDLLEIMKKFVPPDYKIHRHCFTGSYPVIEPLLKYFPNMSVGFTAVLTYSSAWEAREALRQIPLE
RIIVETDAPYFLPRQVPKSLCQYAHPGLALHTVREIARVKDQPLSLTLAALRENTSRLYSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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