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Report for CCDS14057.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14057.1 Public Homo sapiens 22 PARVG 24 110 108 CCDS HistoryNCBI Gene:64098Re-query CCDS DB by CCDS ID:14057.1Re-query CCDS DB by GeneID:64098See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14057.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000422871.5 ENSP00000391453.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000422871.5Link to Ensembl Protein Viewer:ENSP00000391453.1Re-query CCDS DB by Nucleotide ID:ENST00000422871Re-query CCDS DB by Protein ID:ENSP00000391453
Original member Current member EBI ENST00000444313.8 ENSP00000391583.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000444313.8Link to Ensembl Protein Viewer:ENSP00000391583.2Re-query CCDS DB by Nucleotide ID:ENST00000444313Re-query CCDS DB by Protein ID:ENSP00000391583
Original member Current member NCBI NM_022141.7 NP_071424.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_022141.7Link to Protein Sequence:NP_071424.1Re-query CCDS DB by Nucleotide ID:NM_022141Re-query CCDS DB by Protein ID:NP_071424Link to BLAST:NP_071424.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_071424.1 331 Q9HBI0-1 331 100% 0 0

Chromosomal Locations for CCDS 14057.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 44183330 44183408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44185808 44185872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44187776 44187878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44189114 44189254 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44190551 44190666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44192049 44192104 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44193801 44193823 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44196155 44196213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44196347 44196415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44198621 44198722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44205757 44205829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 44206317 44206426 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGGAGCCGGAGTTCTTGTACGACCTGCTGCAGCTCCCCAAGGGGGTGGAGCCCCCAGCGGAGGAGGAGC
TCTCAAAAGGAGGAAAGAAGAAATACCTGCCACCCACTTCCCGGAAGGACCCCAAATTTGAAGAACTGCA
GAAGGTGTTGATGGAGTGGATCAATGCCACTCTTCTCCCCGAGCACATTGTGGTCCGCAGCCTGGAGGAG
GACATGTTCGACGGGCTCATCCTACACCACCTATTCCAGAGGCTGGCGGCGCTCAAGCTGGAAGCAGAGG
ACATCGCCCTGACAGCCACAAGCCAGAAGCACAAGCTCACAGTGGTGCTGGAGGCCGTGAACCGGAGTCT
GCAGCTGGAGGAGTGGCAGGCCAAGTGGAGCGTGGAGAGCATCTTCAACAAGGACCTGTTGTCTACCCTG
CACCTCCTTGTGGCCCTGGCCAAGCGCTTCCAGCCCGACCTCTCCCTCCCAACCAACGTCCAGGTGGAGG
TCATCACTATCGAGAGCACCAAAAGTGGTCTGAAGTCAGAGAAGTTGGTGGAACAGCTCACTGAATACAG
CACAGACAAGGACGAGCCTCCAAAGGACGTCTTTGATGAATTATTTAAGCTGGCTCCGGAGAAAGTGAAC
GCAGTGAAAGAGGCCATCGTGAACTTTGTCAACCAGAAGCTGGACCGCCTGGGCCTGTCTGTGCAGAATC
TGGACACCCAGTTTGCAGATGGGGTCATCTTACTCTTGCTGATTGGACAACTTGAAGGCTTCTTCCTGCA
CTTAAAGGAATTCTACCTCACTCCCAACTCTCCTGCAGAAATGCTGCACAACGTCACCCTGGCGCTGGAG
CTGCTGAAGGACGAGGGCCTGCTCAGCTGCCCTGTCAGCCCTGAAGATATCGTGAACAAGGATGCCAAGA
GCACACTGAGGGTGCTCTATGGTCTGTTCTGCAAGCACACGCAGAAGGCACACAGGGACAGGACGCCCCA
TGGAGCCCCGAATTGA

Translation (331 aa):
MEPEFLYDLLQLPKGVEPPAEEELSKGGKKKYLPPTSRKDPKFEELQKVLMEWINATLLPEHIVVRSLEE
DMFDGLILHHLFQRLAALKLEAEDIALTATSQKHKLTVVLEAVNRSLQLEEWQAKWSVESIFNKDLLSTL
HLLVALAKRFQPDLSLPTNVQVEVITIESTKSGLKSEKLVEQLTEYSTDKDEPPKDVFDELFKLAPEKVN
AVKEAIVNFVNQKLDRLGLSVQNLDTQFADGVILLLLIGQLEGFFLHLKEFYLTPNSPAEMLHNVTLALE
LLKDEGLLSCPVSPEDIVNKDAKSTLRVLYGLFCKHTQKAHRDRTPHGAPN


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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