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Report for CCDS8063.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8063.1 Public Homo sapiens 11 FKBP2 24 110 108 CCDS HistoryNCBI Gene:2286Re-query CCDS DB by CCDS ID:8063.1Re-query CCDS DB by GeneID:2286See the combined annotation on chromosome 11 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8063.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309366.9 ENSP00000310935.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309366.9Link to Ensembl Protein Viewer:ENSP00000310935.4Re-query CCDS DB by Nucleotide ID:ENST00000309366Re-query CCDS DB by Protein ID:ENSP00000310935
Original member Current member EBI ENST00000449942.6 ENSP00000398147.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000449942.6Link to Ensembl Protein Viewer:ENSP00000398147.2Re-query CCDS DB by Nucleotide ID:ENST00000449942Re-query CCDS DB by Protein ID:ENSP00000398147
Original member Current member NCBI NM_001135208.2 NP_001128680.1 Accepted alive Link to Nucleotide Sequence:NM_001135208.2Link to Protein Sequence:NP_001128680.1Re-query CCDS DB by Nucleotide ID:NM_001135208Re-query CCDS DB by Protein ID:NP_001128680Link to BLAST:NP_001128680.1
Original member Current member NCBI NM_001370360.1 NP_001357289.1 Accepted alive Link to Nucleotide Sequence:NM_001370360.1Link to Protein Sequence:NP_001357289.1Re-query CCDS DB by Nucleotide ID:NM_001370360Re-query CCDS DB by Protein ID:NP_001357289Link to BLAST:NP_001357289.1
Original member Current member NCBI NM_001370362.1 NP_001357291.1 Accepted alive Link to Nucleotide Sequence:NM_001370362.1Link to Protein Sequence:NP_001357291.1Re-query CCDS DB by Nucleotide ID:NM_001370362Re-query CCDS DB by Protein ID:NP_001357291Link to BLAST:NP_001357291.1
Original member Current member NCBI NM_001370363.1 NP_001357292.1 Accepted alive Link to Nucleotide Sequence:NM_001370363.1Link to Protein Sequence:NP_001357292.1Re-query CCDS DB by Nucleotide ID:NM_001370363Re-query CCDS DB by Protein ID:NP_001357292Link to BLAST:NP_001357292.1
Original member Current member NCBI NM_004470.4 NP_004461.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_004470.4Link to Protein Sequence:NP_004461.2Re-query CCDS DB by Nucleotide ID:NM_004470Re-query CCDS DB by Protein ID:NP_004461Link to BLAST:NP_004461.2
Original member Current member NCBI NM_057092.2 NP_476433.1 Accepted alive Link to Nucleotide Sequence:NM_057092.2Link to Protein Sequence:NP_476433.1Re-query CCDS DB by Nucleotide ID:NM_057092Re-query CCDS DB by Protein ID:NP_476433Link to BLAST:NP_476433.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001128680.1 142 P26885 142 100% 0 0
NP_001357289.1 142 P26885 142 100% 0 0
NP_001357291.1 142 P26885 142 100% 0 0
NP_001357292.1 142 P26885 142 100% 0 0
NP_004461.2 142 P26885 142 100% 0 0
NP_476433.1 142 P26885 142 100% 0 0

Chromosomal Locations for CCDS 8063.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 11 (NC_000011.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11See the combined annotation on chromosome 11 in Sequence Viewer

Chromosome Start Stop Links
11 64242388 64242558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64243199 64243311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64243451 64243497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64243841 64243876 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11
11 64243968 64244029 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 11Link to Ensembl Genome Browser on chromosome 11

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (429 nt):
ATGAGGCTGAGCTGGTTCCGGGTCCTGACAGTACTGTCCATCTGCCTGAGCGCCGTGGCCACGGCCACGG
GGGCCGAGGGCAAAAGGAAGCTGCAGATCGGGGTCAAGAAGCGGGTGGACCACTGTCCCATCAAATCGCG
CAAAGGGGATGTCCTGCACATGCACTACACGGGGAAGCTGGAAGATGGGACAGAGTTTGACAGCAGCCTG
CCCCAGAACCAGCCCTTTGTCTTCTCCCTTGGCACAGGCCAGGTCATCAAGGGCTGGGACCAGGGGCTGC
TGGGGATGTGTGAGGGGGAAAAGCGCAAGCTGGTGATCCCATCCGAGCTAGGGTATGGAGAGCGGGGAGC
TCCCCCAAAGATTCCAGGTGGTGCAACCCTGGTGTTCGAGGTGGAGCTGCTCAAAATAGAGCGACGAACT
GAGCTGTAA

Translation (142 aa):
MRLSWFRVLTVLSICLSAVATATGAEGKRKLQIGVKKRVDHCPIKSRKGDVLHMHYTGKLEDGTEFDSSL
PQNQPFVFSLGTGQVIKGWDQGLLGMCEGEKRKLVIPSELGYGERGAPPKIPGGATLVFEVELLKIERRT
EL


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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