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Report for CCDS11415.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11415.1 Public Homo sapiens 17 NKIRAS2 24 110 108 CCDS HistoryNCBI Gene:28511Re-query CCDS DB by CCDS ID:11415.1Re-query CCDS DB by GeneID:28511See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11415.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307641.9 ENSP00000303580.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000307641.9Link to Ensembl Protein Viewer:ENSP00000303580.5Re-query CCDS DB by Nucleotide ID:ENST00000307641Re-query CCDS DB by Protein ID:ENSP00000303580
Original member Current member EBI ENST00000393880.5 ENSP00000377458.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393880.5Link to Ensembl Protein Viewer:ENSP00000377458.1Re-query CCDS DB by Nucleotide ID:ENST00000393880Re-query CCDS DB by Protein ID:ENSP00000377458
Original member Current member EBI ENST00000393881.7 ENSP00000377459.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000393881.7Link to Ensembl Protein Viewer:ENSP00000377459.3Re-query CCDS DB by Nucleotide ID:ENST00000393881Re-query CCDS DB by Protein ID:ENSP00000377459
Original member Current member EBI ENST00000393885.9 ENSP00000377463.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393885.9Link to Ensembl Protein Viewer:ENSP00000377463.3Re-query CCDS DB by Nucleotide ID:ENST00000393885Re-query CCDS DB by Protein ID:ENSP00000377463
Original member Current member NCBI NM_001001349.2 NP_001001349.1 Accepted alive Link to Nucleotide Sequence:NM_001001349.2Link to Protein Sequence:NP_001001349.1Re-query CCDS DB by Nucleotide ID:NM_001001349Re-query CCDS DB by Protein ID:NP_001001349Link to BLAST:NP_001001349.1
Original member Current member NCBI NM_001144927.2 NP_001138399.1 Accepted alive Link to Nucleotide Sequence:NM_001144927.2Link to Protein Sequence:NP_001138399.1Re-query CCDS DB by Nucleotide ID:NM_001144927Re-query CCDS DB by Protein ID:NP_001138399Link to BLAST:NP_001138399.1
Original member Current member NCBI NM_017595.6 NP_060065.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_017595.6Link to Protein Sequence:NP_060065.2Re-query CCDS DB by Nucleotide ID:NM_017595Re-query CCDS DB by Protein ID:NP_060065Link to BLAST:NP_060065.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001001349.1 191 Q9NYR9-1 191 100% 0 0
NP_001138399.1 191 Q9NYR9-1 191 100% 0 0
NP_060065.2 191 Q9NYR9-1 191 100% 0 0

Chromosomal Locations for CCDS 11415.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 42021578 42021671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42022399 42022640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 42023654 42023893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (576 nt):
ATGGGGAAGAGCTGCAAGGTGGTCGTGTGTGGCCAGGCGTCTGTGGGCAAAACTTCAATCCTGGAGCAGC
TT
CTGTATGGGAACCATGTAGTGGGTTCGGAGATGATCGAGACGCAGGAGGACATCTACGTGGGCTCCAT
T
GAGACAGACCGGGGGGTGCGAGAGCAGGTGCGTTTCTATGACACCCGGGGGCTCCGAGATGGGGCCGAA
CTG
CCCCGACACTGCTTCTCTTGCACTGATGGCTACGTCCTGGTCTATAGCACAGATAGCAGAGAGTCTT
TT
CAGCGTGTGGAGCTGCTCAAGAAGGAGATTGACAAATCCAAGGACAAGAAGGAGGTCACCATCGTGGT
C
CTTGGCAACAAGTGTGACTTACAGGAGCAGCGGCGTGTAGACCCAGATGTGGCTCAGCACTGGGCCAAG
TCA
GAGAAGGTGAAGCTGTGGGAGGTGTCAGTGGCGGACCGGCGCTCCCTCCTGGAGCCCTTTGTCTACT
TG
GCCAGCAAGATGACGCAACCCCAGAGCAAGTCTGCCTTCCCCCTCAGCCGGAAGAACAAGGGCAGCGG
C
TCCTTGGATGGCTGA


Translation (191 aa):
MGKSCKVVVCGQASVGKTSILEQLLYGNHVVGSEMIETQEDIYVGSIETDRGVREQVRFYDTRGLRDGAE
L
PRHCFSCTDGYVLVYSTDSRESFQRVELLKKEIDKSKDKKE
VTIVVLGNKCDLQEQRRVDPDVAQHWAK
S
EKVKLWEVSVADRRSLLEPFVYLASKMTQPQSKSAFPLSRKNKGSGSLDG




Links Key
 Links to:   History report
  BLAST report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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