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Report for CCDS42758.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42758.1 Public Homo sapiens 2 MZT2A 24 110 108 CCDS HistoryNCBI Gene:653784Re-query CCDS DB by CCDS ID:42758.1Re-query CCDS DB by GeneID:653784See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42758.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000309451.7 ENSP00000311500.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000309451.7Link to Ensembl Protein Viewer:ENSP00000311500.6Re-query CCDS DB by Nucleotide ID:ENST00000309451Re-query CCDS DB by Protein ID:ENSP00000311500
Original member Current member NCBI NM_001085365.2 NP_001078834.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001085365.2Link to Protein Sequence:NP_001078834.1Re-query CCDS DB by Nucleotide ID:NM_001085365Re-query CCDS DB by Protein ID:NP_001078834Link to BLAST:NP_001078834.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001078834.1 158 Q6P582 158 100% 0 0

Chromosomal Locations for CCDS 42758.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 131484061 131484218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131491876 131492024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 131492207 131492376 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (477 nt):
ATGGCGGCGCAGGGCGTAGGGCCTGGGCCGGGGTCGGCGGCGCCCCCGGGGCTGGAGGCGGCCCGGCAGA
AGCTGGCGCTGCGGCGCAAGAAGGTGCTGAGCACCGAGGAGATGGAGCTGTACGAGCTGGCTCAGGCGGC
GGGCGGCGGTATCGACCCCGACGTGTTCAAGATCCTGGTGGACCTGCTGAAGCTGAACGTGGCCCCCCTC
GCCGTCTTCCAGATGCTCAAGTCCATGTGTGCCGGGCAGAGGCTAGCGAGCGAGCCCCAGGACCCTGCGG
CCGTGTCTCTGCCCACGTCGAGCGTGCCCGAGACCCGAGGGAGAGACAAAGGCAGCGCTGCCCTCGGGGG
AGTATTGGCCCTGGCGGAACGCAGCAACCACGAGGGATCCAGCCAGAGGATGCCACGCCAGCCCAGCGCT
ACCAGGCTGCCCAAGGGGGGCGGGCCTGGGAAGAGCCCTACGCAGGGCAGCACCTAG

Translation (158 aa):
MAAQGVGPGPGSAAPPGLEAARQKLALRRKKVLSTEEMELYELAQAAGGGIDPDVFKILVDLLKLNVAPL
AVFQMLKSMCAGQRLASEPQDPAAVSLPTSSVPETRGRDKGSAALGGVLALAERSNHEGSSQRMPRQPSA
TRLPKGGGPGKSPTQGST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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