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Report for CCDS597.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
597.1 Public Homo sapiens 1 PARS2 24 110 108 CCDS HistoryNCBI Gene:25973Re-query CCDS DB by CCDS ID:597.1Re-query CCDS DB by GeneID:25973See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 597.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371279.4 ENSP00000360327.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371279.4Link to Ensembl Protein Viewer:ENSP00000360327.3Re-query CCDS DB by Nucleotide ID:ENST00000371279Re-query CCDS DB by Protein ID:ENSP00000360327
Original member Current member NCBI NM_152268.4 NP_689481.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152268.4Link to Protein Sequence:NP_689481.2Re-query CCDS DB by Nucleotide ID:NM_152268Re-query CCDS DB by Protein ID:NP_689481Link to BLAST:NP_689481.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689481.2 475 Q7L3T8 475 100% 0 0

Chromosomal Locations for CCDS 597.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 54757734 54759161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1428 nt):
ATGGAAGGGCTGCTGACAAGATGCAGAGCATTGCCCGCCCTGGCCACCTGCAGCCGCCAGCTCTCTGGGT
ATGTTCCTTGCAGGTTTCACCACTGTGCCCCAAGAAGAGGGCGGCGCCTGCTGCTGTCTCGTGTGTTCCA
GCCACAGAACCTTCGGGAAGACCGGGTGCTCTCCCTGCAGGACAAATCTGATGACCTGACCTGTAAGAGC
CAGCGGCTGATGCTGCAGGTGGGCCTGATCTACCCAGCAAGCCCCGGCTGTTACCACCTCCTGCCATATA
CCGTCCGTGCCATGGAGAAGCTCGTGCGAGTGATAGACCAGGAGATGCAGGCCATCGGGGGCCAGAAAGT
CAACATGCCCAGCCTCAGCCCGGCAGAGCTCTGGCAAGCCACCAACCGGTGGGACTTGATGGGCAAAGAG
CTGCTAAGACTTAGAGACAGGCATGGCAAGGAATACTGCTTAGGACCAACTCACGAGGAAGCCATTACGG
CCTTAATTGCCTCCCAGAAGAAACTGTCCTACAAGCAGCTTCCCTTCCTGCTGTACCAAGTGACAAGGAA
GTTTCGGGATGAGCCCAGGCCCCGCTTTGGTCTTCTCCGTGGCCGAGAGTTTTACATGAAGGATATGTAC
ACCTTTGACTCCTCCCCAGAGGCTGCCCAGCAGACCTACAGCCTGGTGTGTGATGCCTACTGCAGCCTGT
TCAACAAGCTAGGGCTGCCATTTGTCAAGGTCCAGGCCGATGTGGGCACCATCGGGGGCACAGTGTCTCA
TGAGTTCCAGCTCCCAGTGGATATTGGAGAGGACCGGCTTGCCATCTGTCCCCGCTGCAGCTTCTCAGCC
AACATGGAGACACTAGACTTGTCACAAATGAACTGCCCTGCTTGCCAGGGCCCATTGACTAAAACCAAAG
GCATTGAGGTGGGGCACACATTTTACCTGGGTACCAAGTACTCATCCATTTTCAATGCCCAGTTTACCAA
TGTCTGTGGCAAACCAACCCTGGCTGAAATGGGGTGCTATGGCTTGGGTGTGACACGGATCTTGGCTGCT
GCCATTGAAGTCCTCTCTACAGAAGACTGTGTCCGCTGGCCCAGCCTACTGGCCCCTTACCAAGCCTGCC
TCATCCCCCCTAAGAAGGGCAGTAAGGAGCAGGCGGCCTCCGAGCTCATAGGGCAGCTGTACGACCACAT
CACAGAGGCAGTGCCTCAGCTTCACGGGGAGGTGCTCCTGGACGACAGGACCCATCTGACCATCGGAAAC
AGACTGAAAGATGCCAACAAGTTTGGCTACCCCTTTGTGATAATCGCTGGCAAGAGGGCCCTGGAGGACC
CTGCACATTTTGAGGTTTGGTGTCAGAACACTGGTGAGGTGGCCTTCCTCACCAAAGATGGAGTCATGGA
TTTACTGACCCCAGTGCAGACTGTCTAA

Translation (475 aa):
MEGLLTRCRALPALATCSRQLSGYVPCRFHHCAPRRGRRLLLSRVFQPQNLREDRVLSLQDKSDDLTCKS
QRLMLQVGLIYPASPGCYHLLPYTVRAMEKLVRVIDQEMQAIGGQKVNMPSLSPAELWQATNRWDLMGKE
LLRLRDRHGKEYCLGPTHEEAITALIASQKKLSYKQLPFLLYQVTRKFRDEPRPRFGLLRGREFYMKDMY
TFDSSPEAAQQTYSLVCDAYCSLFNKLGLPFVKVQADVGTIGGTVSHEFQLPVDIGEDRLAICPRCSFSA
NMETLDLSQMNCPACQGPLTKTKGIEVGHTFYLGTKYSSIFNAQFTNVCGKPTLAEMGCYGLGVTRILAA
AIEVLSTEDCVRWPSLLAPYQACLIPPKKGSKEQAASELIGQLYDHITEAVPQLHGEVLLDDRTHLTIGN
RLKDANKFGYPFVIIAGKRALEDPAHFEVWCQNTGEVAFLTKDGVMDLLTPVQTV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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