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Report for CCDS33077.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33077.1 Public Homo sapiens 19 ZNF473 24 110 108 CCDS HistoryNCBI Gene:25888Re-query CCDS DB by CCDS ID:33077.1Re-query CCDS DB by GeneID:25888See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33077.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270617.8 ENSP00000270617.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000270617.8Link to Ensembl Protein Viewer:ENSP00000270617.3Re-query CCDS DB by Nucleotide ID:ENST00000270617Re-query CCDS DB by Protein ID:ENSP00000270617
Original member Current member EBI ENST00000391821.6 ENSP00000375697.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391821.6Link to Ensembl Protein Viewer:ENSP00000375697.1Re-query CCDS DB by Nucleotide ID:ENST00000391821Re-query CCDS DB by Protein ID:ENSP00000375697
Original member Current member EBI ENST00000595661.5 ENSP00000472808.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000595661.5Link to Ensembl Protein Viewer:ENSP00000472808.1Re-query CCDS DB by Nucleotide ID:ENST00000595661Re-query CCDS DB by Protein ID:ENSP00000472808
Original member Current member NCBI NM_001006656.4 NP_001006657.1 Accepted alive Link to Nucleotide Sequence:NM_001006656.4Link to Protein Sequence:NP_001006657.1Re-query CCDS DB by Nucleotide ID:NM_001006656Re-query CCDS DB by Protein ID:NP_001006657Link to BLAST:NP_001006657.1
Original member Current member NCBI NM_015428.4 NP_056243.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015428.4Link to Protein Sequence:NP_056243.1Re-query CCDS DB by Nucleotide ID:NM_015428Re-query CCDS DB by Protein ID:NP_056243Link to BLAST:NP_056243.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001006657.1 871 Q8WTR7 871 100% 0 0
NP_056243.1 871 Q8WTR7 871 100% 0 0

Chromosomal Locations for CCDS 33077.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 50031083 50031091 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50039161 50039287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50041730 50041819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 50044670 50047059 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2616 nt):
ATGGCTGAGGAATTTGTGACCCTCAAGGATGTCGGCATGGACTTCACCTTGGGAGACTGGGAGCAGCTCG
GGCTGGAACAGGGGGACACGTTCTGGGACACAGCGTTGGACAATTGCCAGGACCTCTTCCTGCTGGACCC
CCCAAGACCCAACCTGACCTCCCACCCAGATGGCAGTGAAGATCTGGAGCCTCTGGCAGGAGGAAGCCCA
GAAGCAACAAGCCCTGATGTGACTGAGACCAAGAACTCTCCTCTGATGGAGGATTTCTTCGAAGAAGGAT
TCTCCCAGGAGATTATAGAGATGTTATCCAAGGATGGCTTCTGGAACTCCAATTTCGGAGAAGCCTGTAT
AGAGGACACCTGGTTAGATAGTTTGCTAGGCGATCCAGAAAGTCTTCTGAGGTCTGATATTGCCACCAAC
GGGGAAAGTCCCACGGAATGCAAGAGTCATGAATTAAAGAGAGGACTCAGTCCTGTGTCCACCGTTTCCA
CGGGAGAAGATTCCATGGTGCATAATGTTTCTGAAAAGACCCTCACACCAGCTAAGTCTAAGGAATATAG
GGGTGAGTTTTTCTCCTACTCCGACCACAGCCAGCAGGATTCTGTTCAGGAAGGGGAGAAACCATATCAA
TGTAGTGAATGTGGGAAAAGCTTCAGTGGGAGTTACCGTCTTACCCAGCACTGGATCACTCATACTAGGG
AGAAACCCACTGTCCATCAAGAGTGTGAGCAAGGTTTTGACCGGAATGCTTCCCTTTCTGTGTATCCGAA
AACTCACACGGGCTACAAATTCTATGTGTGTAATGAATATGGGACAACTTTTAGTCAGAGTACATACCTG
TGGCATCAGAAAACTCACACTGGAGAAAAACCATGTAAGAGTCAAGATAGTGACCACCCACCCAGTCATG
ACACACAGCCTGGTGAGCATCAGAAAACTCACACAGATAGTAAGTCCTACAACTGTAACGAATGCGGCAA
GGCTTTTACCCGGATCTTCCACCTTACTCGGCACCAGAAGATCCACACTCGGAAACGCTATGAGTGTTCC
AAGTGCCAGGCGACCTTCAACTTGAGAAAACACCTCATCCAACATCAGAAAACTCACGCTGCAAAAACTA
CCTCTGAGTGTCAGGAGTGTGGGAAGATTTTTAGGCACAGTTCGCTGCTCATTGAACACCAGGCTCTTCA
TGCTGGAGAGGAGCCTTATAAGTGTAACGAACGTGGGAAATCCTTCAGGCATAACTCTACCCTAAAGATC
CATCAGAGGGTTCACAGTGGAGAGAAGCCTTACAAATGCAGTGAGTGTGGGAAGGCCTTCCACCGGCACA
CTCACCTTAATGAACATCGGCGAATTCATACAGGCTACAGACCCCACAAATGTCAGGAATGCGTCAGGAG
TTTCAGCCGGCCCTCACATCTGATGCGACATCAGGCCATTCACACCGCAGAAAAGCCCTATAGCTGTGCT
GAATGCAAGGAGACTTTCAGCGATAACAATCGCCTTGTGCAACACCAGAAAATGCACACTGTCAAAACCC
CATATGAATGTCAGGAGTGCGGAGAACGCTTCATTTGCGGCTCAACCCTGAAGTGCCACGAGAGTGTTCA
CGCCAGAGAAAAACAAGGATTTTTTGTGAGTGGGAAGATCTTGGATCAGAACCCAGAACAGAAAGAGAAG
TGCTTTAAGTGTAACAAATGTGAGAAAACCTTTAGCTGCAGCAAATACCTAACTCAGCACGAGAGGATTC
ACACCAGGGGAGTGAAGCCCTTTGAATGTGACCAGTGTGGGAAAGCCTTTGGCCAAAGTACTCGGCTCAT
TCACCATCAAAGAATCCACTCTAGAGTGAGGCTGTATAAATGGGGTGAGCAAGGGAAAGCCATCAGCAGT
GCCTCCCTTATCAAACTTCAGTCCTTCCACACAAAGGAGCACCCTTTTAAATGTAACGAATGCGGAAAGA
CCTTCAGCCACAGTGCACACCTCTCAAAACATCAGTTAATTCACGCTGGAGAGAATCCCTTTAAATGTAG
TAAGTGTGACAGAGTCTTCACCCAGAGAAACTACCTTGTTCAGCATGAGCGAACTCATGCCAGAAAGAAG
CCGTTGGTGTGTAACGAATGCGGGAAAACGTTCCGTCAGAGCTCATGCCTTTCTAAGCATCAGAGAATTC
ACTCAGGTGAGAAGCCCTATGTATGTGATTACTGCGGGAAGGCCTTCGGCCTGAGTGCTGAGCTTGTCCG
CCACCAGAGAATTCACACTGGAGAAAAGCCTTATGTTTGTCAGGAATGCGGGAAAGCCTTCACCCAGAGC
TCATGCCTTTCTATTCACCGGAGAGTTCACACTGGGGAGAAGCCCTACAGATGTGGTGAATGTGGGAAAG
CCTTTGCCCAGAAAGCAAATCTAACACAGCACCAGAGAATTCACACAGGGGAGAAGCCTTACTCCTGTAA
TGTGTGTGGCAAAGCTTTTGTCCTCAGTGCCCATCTCAACCAGCACCTGAGAGTTCACACCCAGGAGACA
CTTTATCAGTGTCAACGTTGCCAGAAAGCCTTTCGGTGCCACTCGAGCCTCAGCCGCCATCAGCGTGTAC
ACAACAAGCAGCAATACTGCCTGTAG

Translation (871 aa):
MAEEFVTLKDVGMDFTLGDWEQLGLEQGDTFWDTALDNCQDLFLLDPPRPNLTSHPDGSEDLEPLAGGSP
EATSPDVTETKNSPLMEDFFEEGFSQEIIEMLSKDGFWNSNFGEACIEDTWLDSLLGDPESLLRSDIATN
GESPTECKSHELKRGLSPVSTVSTGEDSMVHNVSEKTLTPAKSKEYRGEFFSYSDHSQQDSVQEGEKPYQ
CSECGKSFSGSYRLTQHWITHTREKPTVHQECEQGFDRNASLSVYPKTHTGYKFYVCNEYGTTFSQSTYL
WHQKTHTGEKPCKSQDSDHPPSHDTQPGEHQKTHTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKRYECS
KCQATFNLRKHLIQHQKTHAAKTTSECQECGKIFRHSSLLIEHQALHAGEEPYKCNERGKSFRHNSTLKI
HQRVHSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPHKCQECVRSFSRPSHLMRHQAIHTAEKPYSCA
ECKETFSDNNRLVQHQKMHTVKTPYECQECGERFICGSTLKCHESVHAREKQGFFVSGKILDQNPEQKEK
CFKCNKCEKTFSCSKYLTQHERIHTRGVKPFECDQCGKAFGQSTRLIHHQRIHSRVRLYKWGEQGKAISS
ASLIKLQSFHTKEHPFKCNECGKTFSHSAHLSKHQLIHAGENPFKCSKCDRVFTQRNYLVQHERTHARKK
PLVCNECGKTFRQSSCLSKHQRIHSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPYVCQECGKAFTQS
SCLSIHRRVHTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET
LYQCQRCQKAFRCHSSLSRHQRVHNKQQYCL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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