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Report for CCDS41756.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
41756.1 Public Homo sapiens 12 PRR4 24 110 108 CCDS HistoryNCBI Gene:11272Re-query CCDS DB by CCDS ID:41756.1Re-query CCDS DB by GeneID:11272See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 41756.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000228811.8 ENSP00000228811.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000228811.8Link to Ensembl Protein Viewer:ENSP00000228811.4Re-query CCDS DB by Nucleotide ID:ENST00000228811Re-query CCDS DB by Protein ID:ENSP00000228811
Original member Current member NCBI NM_007244.3 NP_009175.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_007244.3Link to Protein Sequence:NP_009175.2Re-query CCDS DB by Nucleotide ID:NM_007244Re-query CCDS DB by Protein ID:NP_009175Link to BLAST:NP_009175.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_009175.2 134 Q16378-1 134 100% 0 0

Chromosomal Locations for CCDS 41756.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 10847063 10847367 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10848372 10848407 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 10849374 10849437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (405 nt):
ATGCTGCTGGTCCTGCTCTCAGTGGTCCTTCTGGCTCTGAGCTCAGCTCAGAGCACAGATAATGATGTGA
ACTATGAAGACTTTACTTTCACCATACCAGATGTAGAGGACTCAAGTCAGAGACCAGATCAGGGACCCCA
GAGACCTCCTCCTGAAGGACTCCTACCTAGACCCCCTGGTGATAGTGGTAACCAAGATGATGGTCCTCAG
CAGAGACCACCAAAACCAGGAGGCCATCACCGCCATCCTCCCCCACCTCCTTTTCAAAATCAGCAACGAC
CACCCCGACGAGGACACCGTCAACTCTCTCTACCCCGATTTCCTTCTGTCAGCCTGCAGGAAGCATCATC
ATTCTTCCAGAGGGACAGACCAGCAAGACATCCCCAGGAGCAACCACTCTGGTAA

Translation (134 aa):
MLLVLLSVVLLALSSAQSTDNDVNYEDFTFTIPDVEDSSQRPDQGPQRPPPEGLLPRPPGDSGNQDDGPQ
QRPPKPGGHHRHPPPPPFQNQQRPPRRGHRQLSLPRFPSVSLQEASSFFQRDRPARHPQEQPLW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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