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Report for CCDS9514.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9514.1 Public Homo sapiens 13 CARS2 24 110 108 CCDS HistoryNCBI Gene:79587Re-query CCDS DB by CCDS ID:9514.1Re-query CCDS DB by GeneID:79587See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9514.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257347.9 ENSP00000257347.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257347.9Link to Ensembl Protein Viewer:ENSP00000257347.4Re-query CCDS DB by Nucleotide ID:ENST00000257347Re-query CCDS DB by Protein ID:ENSP00000257347
Original member Current member NCBI NM_024537.4 NP_078813.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024537.4Link to Protein Sequence:NP_078813.1Re-query CCDS DB by Nucleotide ID:NM_024537Re-query CCDS DB by Protein ID:NP_078813Link to BLAST:NP_078813.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078813.1 564 Q9HA77 564 100% 0 0

Chromosomal Locations for CCDS 9514.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 110641537 110641608 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110642315 110642521 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110644385 110644483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110645967 110646090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110647101 110647239 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110651034 110651100 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110663451 110663518 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110667340 110667473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110676974 110677103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110683051 110683134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110687721 110687826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110687947 110688018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110701438 110701555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110705521 110705571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 110705870 110706093 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1695 nt):
ATGTTGAGGACTACGCGCGGCCCAGGCCTGGGCCCCCCGCTGCTCCAGGCCGCGCTGGGCCTTGGGCGGG
CTGGGTGGCACTGGCCTGCGGGCCGGGCGGCGAGCGGGGGGCGCGGGCGGGCCTGGCTGCAGCCCACGGG
CCGGGAGACGGGTGTGCAGGTGTACAACAGCCTCACCGGGAGGAAGGAACCCCTAATCGTGGCGCACGCC
GAAGCCGCCTCCTGGTATAGCTGTGGACCAACTGTATATGATCATGCGCACCTTGGCCATGCTTGCTCAT
ATGTTAGATTTGATATCATTCGAAGGATCCTAACCAAGGTTTTTGGATGCAGCATAGTCATGGTGATGGG
TATTACAGATGTAGATGATAAAATCATCAAAAGAGCCAATGAGATGAATATTTCCCCCGCTTCCCTCGCC
AGTCTTTATGAGGAAGACTTCAAGCAGGACATGGCAGCCCTGAAGGTTCTCCCACCCACGGTGTACCTGA
GGGTAACCGAAAATATTCCTCAGATAATTTCTTTCATTGAAGGAATCATTGCTCGTGGGAACGCTTATTC
AACGGCAAAAGGCAATGTCTACTTCGATCTGAAGTCTAGAGGAGACAAGTATGGCAAATTGGTCGGCGTG
GTCCCTGGTCCAGTCGGAGAGCCAGCGGACTCTGACAAGCGTCATGCCAGTGACTTCGCCCTGTGGAAGG
CGGCCAAACCCCAGGAGGTGTTCTGGGCCTCTCCCTGGGGACCCGGGAGGCCGGGCTGGCACATCGAGTG
CTCTGCCATCGCTAGTATGGTATTTGGAAGTCAACTGGATATCCATTCAGGTGGGATAGATTTAGCTTTT
CCACATCATGAAAACGAAATTGCACAGTGCGAAGTCTTTCATCAGTGCGAGCAGTGGGGAAATTATTTTC
TGCATTCTGGGCATTTGCACGCCAAAGGCAAAGAAGAAAAAATGTCCAAATCATTAAAGAACTACATTAC
TATTAAGGACTTTCTGAAGACCTTTTCCCCCGATGTCTTCCGGTTCTTCTGCCTGCGGAGCAGCTACCGC
TCAGCCATCGACTACAGTGACAGCGCCATGCTCCAAGCTCAGCAGCTGCTCCTGGGGCTGGGCTCTTTCC
TGGAGGACGCACGTGCCTACATGAAGGGGCAGCTGGCCTGCGGCTCCGTCAGGGAAGCGATGCTGTGGGA
GAGGCTCTCCAGCACCAAGAGGGCCGTGAAGGCGGCCTTGGCAGATGATTTTGACACACCCAGGGTGGTT
GATGCCATCCTGGGCCTTGCACACCACGGGAATGGACAGCTCAGGGCGTCCCTGAAGGAACCTGAAGGGC
CGAGAAGTCCTGCTGTGTTTGGTGCCATCATCTCTTACTTTGAACAGTTTTTTGAAACTGTTGGAATTTC
TCTGGCAAATCAACAGTACGTTTCAGGAGACGGCAGCGAGGCTACCTTGCATGGTGTGGTGGACGAGCTG
GTGCGGTTCCGGCAGAAGGTCCGGCAGTTTGCGCTGGCCATGCCCGAGGCCACGGGGGACGCCCGGCGGC
AGCAGCTCCTAGAAAGGCAGCCCCTGCTGGAAGCATGCGACACCCTGCGCCGGGGCCTGACTGCCCACGG
CATCAACATCAAGGACAGAAGCAGTACAACATCCACGTGGGAACTGCTGGATCAAAGGACAAAAGACCAA
AAATCAGCGGGCTGA

Translation (564 aa):
MLRTTRGPGLGPPLLQAALGLGRAGWHWPAGRAASGGRGRAWLQPTGRETGVQVYNSLTGRKEPLIVAHA
EAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCSIVMVMGITDVDDKIIKRANEMNISPASLA
SLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGV
VPGPVGEPADSDKRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAF
PHHENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFLKTFSPDVFRFFCLRSSYR
SAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSVREAMLWERLSSTKRAVKAALADDFDTPRVV
DAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIISYFEQFFETVGISLANQQYVSGDGSEATLHGVVDEL
VRFRQKVRQFALAMPEATGDARRQQLLERQPLLEACDTLRRGLTAHGINIKDRSSTTSTWELLDQRTKDQ
KSAG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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