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Report for CCDS14554.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
14554.1 Public Homo sapiens X PAK3 24 110 108 CCDS HistoryNCBI Gene:5063Re-query CCDS DB by CCDS ID:14554.1Re-query CCDS DB by GeneID:5063See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 14554.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000372007.10 ENSP00000361077.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372007.10Link to Ensembl Protein Viewer:ENSP00000361077.4Re-query CCDS DB by Nucleotide ID:ENST00000372007Re-query CCDS DB by Protein ID:ENSP00000361077
Original member Current member EBI ENST00000425146.5 ENSP00000401982.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000425146.5Link to Ensembl Protein Viewer:ENSP00000401982.1Re-query CCDS DB by Nucleotide ID:ENST00000425146Re-query CCDS DB by Protein ID:ENSP00000401982
Original member Current member EBI ENST00000446737.5 ENSP00000410853.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000446737.5Link to Ensembl Protein Viewer:ENSP00000410853.1Re-query CCDS DB by Nucleotide ID:ENST00000446737Re-query CCDS DB by Protein ID:ENSP00000410853
Original member Current member NCBI NM_001128166.3 NP_001121638.1 Accepted alive Link to Nucleotide Sequence:NM_001128166.3Link to Protein Sequence:NP_001121638.1Re-query CCDS DB by Nucleotide ID:NM_001128166Re-query CCDS DB by Protein ID:NP_001121638Link to BLAST:NP_001121638.1
Original member Current member NCBI NM_001128167.3 NP_001121639.1 Accepted alive Link to Nucleotide Sequence:NM_001128167.3Link to Protein Sequence:NP_001121639.1Re-query CCDS DB by Nucleotide ID:NM_001128167Re-query CCDS DB by Protein ID:NP_001121639Link to BLAST:NP_001121639.1
Original member Current member NCBI NM_001324325.2 NP_001311254.1 Accepted alive Link to Nucleotide Sequence:NM_001324325.2Link to Protein Sequence:NP_001311254.1Re-query CCDS DB by Nucleotide ID:NM_001324325Re-query CCDS DB by Protein ID:NP_001311254Link to BLAST:NP_001311254.1
Original member Current member NCBI NM_001324326.2 NP_001311255.1 Accepted alive Link to Nucleotide Sequence:NM_001324326.2Link to Protein Sequence:NP_001311255.1Re-query CCDS DB by Nucleotide ID:NM_001324326Re-query CCDS DB by Protein ID:NP_001311255Link to BLAST:NP_001311255.1
Original member Current member NCBI NM_001324330.2 NP_001311259.1 Accepted alive Link to Nucleotide Sequence:NM_001324330.2Link to Protein Sequence:NP_001311259.1Re-query CCDS DB by Nucleotide ID:NM_001324330Re-query CCDS DB by Protein ID:NP_001311259Link to BLAST:NP_001311259.1
Original member Current member NCBI NM_001324331.2 NP_001311260.1 Accepted alive Link to Nucleotide Sequence:NM_001324331.2Link to Protein Sequence:NP_001311260.1Re-query CCDS DB by Nucleotide ID:NM_001324331Re-query CCDS DB by Protein ID:NP_001311260Link to BLAST:NP_001311260.1
Original member Current member NCBI NM_001324332.2 NP_001311261.1 Accepted alive Link to Nucleotide Sequence:NM_001324332.2Link to Protein Sequence:NP_001311261.1Re-query CCDS DB by Nucleotide ID:NM_001324332Re-query CCDS DB by Protein ID:NP_001311261Link to BLAST:NP_001311261.1
Original member Current member NCBI NM_001324334.2 NP_001311263.1 Accepted alive Link to Nucleotide Sequence:NM_001324334.2Link to Protein Sequence:NP_001311263.1Re-query CCDS DB by Nucleotide ID:NM_001324334Re-query CCDS DB by Protein ID:NP_001311263Link to BLAST:NP_001311263.1
Original member Current member NCBI NM_002578.5 NP_002569.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002578.5Link to Protein Sequence:NP_002569.1Re-query CCDS DB by Nucleotide ID:NM_002578Re-query CCDS DB by Protein ID:NP_002569Link to BLAST:NP_002569.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001121638.1 544 O75914-2 544 100% 0 0
NP_001121639.1 544 O75914-2 544 100% 0 0
NP_001311254.1 544 O75914-2 544 100% 0 0
NP_001311255.1 544 O75914-2 544 100% 0 0
NP_001311259.1 544 O75914-2 544 100% 0 0
NP_001311260.1 544 O75914-2 544 100% 0 0
NP_001311261.1 544 O75914-2 544 100% 0 0
NP_001311263.1 544 O75914-2 544 100% 0 0
NP_002569.1 544 O75914-2 544 100% 0 0

Chromosomal Locations for CCDS 14554.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome X (NC_000023.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 111123104 111123278 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111142096 111142196 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111147737 111147890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111152410 111152447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111162915 111163046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111163562 111163727 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111173018 111173081 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111192127 111192175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111192506 111192618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111194301 111194418 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111195842 111195941 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111196444 111196640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111216421 111216558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 111220358 111220447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1635 nt):
ATGTCTGACGGTCTGGATAATGAAGAGAAACCCCCGGCTCCTCCACTGAGGATGAATAGTAACAACCGGG
ATTCTTCAGCACTCAACCACAGCTCCAAACCACTTCCCATGGCCCCTGAAGAGAAGAATAAGAAAGCCAG
GCTTCGCTCTATCTTCCCAGGAGGAGGGGATAAAACCAATAAGAAGAAGGAGAAAGAGCGCCCAGAGATC
TCTCTTCCTTCAGACTTTGAGCATACGATTCATGTGGGGTTTGATGCAGTCACCGGGGAATTCACTGGAA
TTCCAGAGCAATGGGCACGATTACTCCAAACTTCCAACATAACAAAATTGGAACAGAAGAAGAACCCACA
AGCTGTTCTAGATGTTCTCAAATTCTATGATTCCAAAGAAACAGTCAACAACCAGAAATACATGAGCTTT
ACATCAGGAGATAAAAGTGCACATGGATACATAGCAGCCCATCCTTCGAGTACAAAAACAGCATCTGAGC
CTCCATTGGCCCCTCCTGTGTCTGAAGAAGAAGATGAAGAGGAAGAAGAAGAAGAAGATGAAAATGAGCC
ACCACCAGTTATCGCACCAAGACCAGAGCATACAAAATCAATCTATACTCGTTCTGTGGTTGAATCCATT
GCTTCACCAGCAGTACCAAATAAAGAGGTCACACCACCCTCTGCTGAAAATGCCAATTCCAGTACTTTGT
ACAGGAACACAGATCGGCAAAGAAAAAAATCCAAGATGACAGATGAGGAGATCTTAGAGAAGCTAAGAAG
CATTGTGAGTGTTGGGGACCCAAAGAAAAAATACACAAGATTTGAAAAAATTGGTCAAGGGGCATCAGGT
ACTGTTTATACAGCACTAGACATTGCAACAGGACAAGAGGTGGCCATAAAGCAGATGAACCTTCAACAGC
AACCCAAGAAGGAATTAATTATTAATGAAATTCTGGTCATGAGGGAAAATAAGAACCCTAATATTGTTAA
TTATTTAGATAGCTACTTGGTGGGTGATGAACTATGGGTAGTCATGGAATACTTGGCTGGTGGCTCTCTG
ACTGATGTGGTCACAGAGACCTGTATGGATGAAGGACAGATAGCAGCTGTCTGCAGAGAGTGCCTGCAAG
CTTTGGATTTCCTGCACTCAAACCAGGTGATCCATAGAGATATAAAGAGTGACAATATTCTTCTCGGGAT
GGATGGCTCTGTTAAATTGACTGACTTTGGGTTCTGTGCCCAGATCACTCCTGAGCAAAGTAAACGAAGC
ACTATGGTGGGAACCCCATATTGGATGGCACCTGAGGTGGTGACTCGAAAAGCTTATGGTCCGAAAGTTG
ATATCTGGTCTCTTGGAATTATGGCAATTGAAATGGTGGAAGGTGAACCCCCTTACCTTAATGAAAATCC
ACTCAGGGCATTGTATCTGATAGCCACTAATGGAACTCCAGAGCTCCAGAATCCTGAGAGACTGTCAGCT
GTATTCCGTGACTTTTTAAATCGCTGTCTTGAGATGGATGTGGATAGGCGAGGATCTGCCAAGGAGCTTT
TGCAGCATCCATTTTTAAAATTAGCCAAGCCTCTCTCCAGCCTGACTCCTCTGATTATCGCTGCAAAGGA
AGCAATTAAGAACAGCAGCCGCTAA

Translation (544 aa):
MSDGLDNEEKPPAPPLRMNSNNRDSSALNHSSKPLPMAPEEKNKKARLRSIFPGGGDKTNKKKEKERPEI
SLPSDFEHTIHVGFDAVTGEFTGIPEQWARLLQTSNITKLEQKKNPQAVLDVLKFYDSKETVNNQKYMSF
TSGDKSAHGYIAAHPSSTKTASEPPLAPPVSEEEDEEEEEEEDENEPPPVIAPRPEHTKSIYTRSVVESI
ASPAVPNKEVTPPSAENANSSTLYRNTDRQRKKSKMTDEEILEKLRSIVSVGDPKKKYTRFEKIGQGASG
TVYTALDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL
TDVVTETCMDEGQIAAVCRECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS
TMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATNGTPELQNPERLSA
VFRDFLNRCLEMDVDRRGSAKELLQHPFLKLAKPLSSLTPLIIAAKEAIKNSSR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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