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Report for CCDS12759.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12759.1 Public Homo sapiens 19 HRC 24 110 108 CCDS HistoryNCBI Gene:3270Re-query CCDS DB by CCDS ID:12759.1Re-query CCDS DB by GeneID:3270See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12759.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000252825.9 ENSP00000252825.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000252825.9Link to Ensembl Protein Viewer:ENSP00000252825.3Re-query CCDS DB by Nucleotide ID:ENST00000252825Re-query CCDS DB by Protein ID:ENSP00000252825
Original member Current member NCBI NM_002152.3 NP_002143.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002152.3Link to Protein Sequence:NP_002143.1Re-query CCDS DB by Nucleotide ID:NM_002152Re-query CCDS DB by Protein ID:NP_002143Link to BLAST:NP_002143.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002143.1 699 P23327 699 100% 0 0

Chromosomal Locations for CCDS 12759.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 49151296 49151332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49151517 49151553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49152004 49152058 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49152310 49152378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49153261 49153331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 49153407 49155237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2100 nt):
ATGGGCCACCATAGGCCATGGCTGCACGCTTCTGTCCTCTGGGCTGGGGTGGCCAGCCTGCTCCTCCCCC
CG
GCCATGACCCAGCAGCTCAGAGGGGATGGGCTAGGCTTCAGAAACCGGAACAACAGCACTGGAGTCGC
C
GGGCTCTCCGAGGAGGCATCAGCAGAGCTTCGCCACCACCTCCACAGCCCTAGAGACCATCCAGATGAG
AAC
AAGGATGTTTCCACAGAGAATGGGCATCATTTCTGGAGCCACCCAGACCGTGAAAAGGAGGATGAAG
AT
GTCTCCAAGGAATATGGGCACCTACTCCCAGGCCACAGGTCCCAAGACCACAAAGTCGGAGATGAGGG
T
GTCTCAGGTGAGGAGGTCTTTGCAGAGCATGGTGGGCAGGCCCGTGGGCACAGAGGCCACGGGAGTGAA
GAC
ACGGAAGACTCAGCTGAGCACAGGCACCACCTCCCCAGCCACAGGAGCCACAGCCATCAAGACGAGG
AT
GAGGATGAAGTTGTGTCCAGTGAGCATCACCATCATATCCTCAGGCATGGACACCGAGGCCATGATGG
G
GAAGATGATGAAGGAGAAGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGGCCTCCACTGAGTATGGA
CAC
CAGGCCCACAGGCACCGAGGCCATGGGAGTGAAGAGGATGAGGATGTCTCAGATGGACACCATCATC
AT
GGCCCCAGCCACAGGCACCAAGGCCATGAAGAAGATGACGATGATGATGATGATGATGATGATGATGA
T
GATGATGATGATGTCTCCATTGAATATAGACACCAGGCTCACAGGCACCAAGGCCACGGGATTGAAGAG
GAT
GAAGATGTCTCAGATGGACACCATCATCGCGACCCCAGCCACAGGCACCGAAGCCATGAAGAAGATG
AC
AATGATGATGATGATGTCTCCACTGAGTATGGACACCAGGCCCACAGGCACCAAGACCACAGAAAGGA
A
GAGGTTGAGGCTGTCTCAGGTGAACACCACCATCATGTCCCTGACCACAGGCACCAAGGCCACAGAGAC
GAG
GAAGAAGATGAGGATGTGTCCACTGAACGTTGGCACCAGGGTCCCCAACATGTCCACCATGGCCTTG
TA
GATGAGGAAGAGGAAGAAGAGGAGATCACAGTCCAGTTCGGCCACTATGTTGCAAGCCACCAACCTCG
A
GGCCACAAGAGTGATGAAGAGGACTTCCAAGATGAGTATAAAACAGAAGTCCCTCACCATCACCACCAC
AGA
GTCCCCAGGGAGGAAGATGAGGAGGTCTCTGCTGAGCTTGGCCACCAGGCCCCCAGCCACAGGCAAA
GC
CACCAAGATGAAGAAACTGGCCATGGTCAAAGAGGGTCCATCAAAGAGATGAGCCATCACCCCCCAGG
A
CACACAGTGGTCAAGGATAGAAGCCATTTGAGGAAGGATGATTCTGAGGAGGAAAAGGAGAAGGAAGAG
GAC
CCCGGCTCCCATGAGGAAGACGATGAAAGTTCAGAGCAGGGAGAGAAAGGCACCCATCATGGCAGCC
GG
GACCAGGAAGATGAGGAGGATGAGGAGGAAGGTCATGGCCTCAGCCTGAACCAGGAGGAGGAAGAAGA
G
GAAGACAAGGAGGAGGAGGAGGAGGAAGAAGACGAGGAGAGGAGGGAAGAGAGGGCTGAGGTTGGGGCC
CCA
CTGAGCCCAGACCACAGCGAGGAGGAAGAGGAGGAGGAGGAGGGGCTGGAGGAAGATGAGCCCCGCT
TC
ACCATCATCCCCAACCCACTGGACAGGAGAGAGGAGGCTGGAGGTGCCTCCAGCGAGGAGGAAAGCGG
T
GAGGACACAGGTCCACAGGATGCTCAGGAGTATGGGAACTACCAGCCAGGGTCCCTGTGTGGCTACTGC
TCC
TTCTGCAATCGATGCACTGAATGTGAGAGCTGTCACTGTGATGAGGAGAACATGGGTGAGCACTGCG
AC
CAGTGCCAGCACTGTCAGTTCTGCTATCTCTGCCCGCTGGTCTGCGAAACGGTCTGCGCTCCAGGAAG
C
TACGTTGACTATTTCTCCTCGTCCCTTTATCAGGCCCTGGCAGACATGCTGGAAACGCCGGAACCCTGA


Translation (699 aa):
MGHHRPWLHASVLWAGVASLLLPPAMTQQLRGDGLGFRNRNNSTGVAGLSEEASAELRHHLHSPRDHPDE
N
KDVSTENGHHFWSHPDREKEDEDVSKEYGHLLPGHRSQDHKVGDEGVSGEEVFAEHGGQARGHRGHGSE
D
TEDSAEHRHHLPSHRSHSHQDEDEDEVVSSEHHHHILRHGHRGHDGEDDEGEEEEEEEEEEEEASTEYG
H
QAHRHRGHGSEEDEDVSDGHHHHGPSHRHQGHEEDDDDDDDDDDDDDDDDVSIEYRHQAHRHQGHGIEE
D
EDVSDGHHHRDPSHRHRSHEEDDNDDDDVSTEYGHQAHRHQDHRKEEVEAVSGEHHHHVPDHRHQGHRD
E
EEDEDVSTERWHQGPQHVHHGLVDEEEEEEEITVQFGHYVASHQPRGHKSDEEDFQDEYKTEVPHHHHH
R
VPREEDEEVSAELGHQAPSHRQSHQDEETGHGQRGSIKEMSHHPPGHTVVKDRSHLRKDDSEEEKEKEE
D
PGSHEEDDESSEQGEKGTHHGSRDQEDEEDEEEGHGLSLNQEEEEEEDKEEEEEEEDEERREERAEVGA
P
LSPDHSEEEEEEEEGLEEDEPRFTIIPNPLDRREEAGGASSEEESGEDT
GPQDAQEYGNYQPGSLCGYC
S
FCN
RCTECESCHCDEENMGEHCDQCQHCQFCYLCPLVCETVCAPGSYVDYFSSSLYQALADMLETPEP



Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser