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Report for CCDS509.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
509.1 Public Homo sapiens 1 DMAP1 24 110 108 CCDS HistoryNCBI Gene:55929Re-query CCDS DB by CCDS ID:509.1Re-query CCDS DB by GeneID:55929See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 509.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000315913.9 ENSP00000312697.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000315913.9Link to Ensembl Protein Viewer:ENSP00000312697.5Re-query CCDS DB by Nucleotide ID:ENST00000315913Re-query CCDS DB by Protein ID:ENSP00000312697
Original member Current member EBI ENST00000361745.10 ENSP00000354697.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361745.10Link to Ensembl Protein Viewer:ENSP00000354697.6Re-query CCDS DB by Nucleotide ID:ENST00000361745Re-query CCDS DB by Protein ID:ENSP00000354697
Original member Current member EBI ENST00000372289.7 ENSP00000361363.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000372289.7Link to Ensembl Protein Viewer:ENSP00000361363.2Re-query CCDS DB by Nucleotide ID:ENST00000372289Re-query CCDS DB by Protein ID:ENSP00000361363
Original member Current member NCBI NM_001034023.2 NP_001029195.1 Accepted alive Link to Nucleotide Sequence:NM_001034023.2Link to Protein Sequence:NP_001029195.1Re-query CCDS DB by Nucleotide ID:NM_001034023Re-query CCDS DB by Protein ID:NP_001029195Link to BLAST:NP_001029195.1
Original member Current member NCBI NM_001034024.2 NP_001029196.1 Accepted alive Link to Nucleotide Sequence:NM_001034024.2Link to Protein Sequence:NP_001029196.1Re-query CCDS DB by Nucleotide ID:NM_001034024Re-query CCDS DB by Protein ID:NP_001029196Link to BLAST:NP_001029196.1
Original member Current member NCBI NM_019100.5 NP_061973.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019100.5Link to Protein Sequence:NP_061973.1Re-query CCDS DB by Nucleotide ID:NM_019100Re-query CCDS DB by Protein ID:NP_061973Link to BLAST:NP_061973.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001029195.1 467 Q9NPF5 467 100% 0 0
NP_001029196.1 467 Q9NPF5 467 100% 0 0
NP_061973.1 467 Q9NPF5 467 100% 0 0

Chromosomal Locations for CCDS 509.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 44213754 44213858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44214350 44214441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44214703 44214898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44218311 44218469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44218588 44218755 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44219056 44219241 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44219406 44219477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44219806 44219878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44220017 44220309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 44220559 44220618 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1404 nt):
ATGGCTACGGGCGCGGATGTACGGGACATTCTAGAACTCGGGGGTCCAGAAGGGGATGCAGCCTCTGGGA
CCATCAGCAAGAAGGACATTATCAACCCGGACAAGAAAAAATCCAAGAAGTCCTCTGAGACACTGACTTT
CAAGAGGCCCGAGGGCATGCACCGGGAAGTCTATGCCTTGCTCTACTCTGACAAGAAGGATGCACCCCCA
CTGCTACCCAGTGACACTGGCCAGGGATACCGTACAGTGAAGGCCAAGTTGGGCTCCAAGAAGGTGCGGC
CTTGGAAGTGGATGCCATTCACCAACCCGGCCCGCAAGGACGGAGCAATGTTCTTCCACTGGCGACGTGC
AGCGGAGGAGGGCAAGGACTACCCCTTTGCCAGGTTCAATAAGACTGTGCAGGTGCCTGTGTACTCGGAG
CAGGAGTACCAGCTTTATCTCCACGATGATGCTTGGACTAAGGCAGAAACTGACCACCTCTTTGACCTCA
GCCGCCGCTTTGACCTGCGTTTTGTTGTTATCCATGACCGGTATGACCACCAGCAGTTCAAGAAGCGTTC
TGTGGAAGACCTGAAGGAGCGGTACTACCACATCTGTGCTAAGCTTGCCAACGTGCGGGCTGTGCCAGGC
ACAGACCTTAAGATACCAGTATTTGATGCTGGGCACGAACGACGGCGGAAGGAACAGCTTGAGCGTCTCT
ACAACCGGACCCCAGAGCAGGTGGCAGAGGAGGAGTACCTGCTACAGGAGCTGCGCAAGATTGAGGCCCG
GAAGAAGGAGCGGGAGAAACGCAGCCAGGACCTGCAGAAGCTGATCACAGCGGCAGACACCACTGCAGAG
CAGCGGCGCACGGAACGCAAGGCCCCCAAAAAGAAGCTACCCCAGAAAAAGGAGGCTGAGAAGCCGGCTG
TTCCTGAGACTGCAGGCATCAAGTTTCCAGACTTCAAGTCTGCAGGTGTCACGCTGCGGAGCCAACGGAT
GAAGCTGCCAAGCTCTGTGGGACAGAAGAAGATCAAGGCCCTGGAACAGATGCTGCTGGAGCTTGGTGTG
GAGCTGAGCCCGACACCTACGGAGGAGCTGGTGCACATGTTCAATGAGCTGCGAAGCGACCTGGTGCTGC
TCTACGAGCTCAAGCAGGCCTGTGCCAACTGCGAGTATGAGCTGCAGATGCTGCGGCACCGTCATGAGGC
ACTGGCCCGGGCTGGTGTGCTAGGGGGCCCTGCCACACCAGCATCAGGCCCAGGCCCGGCCTCTGCTGAG
CCGGCAGTGACTGAACCCGGACTTGGTCCTGACCCCAAGGACACCATCATTGATGTGGTGGGCGCACCCC
TCACGCCCAATTCGAGAAAGCGACGGGAGTCGGCCTCCAGCTCATCTTCCGTGAAGAAAGCCAAGAAGCC
GTGA

Translation (467 aa):
MATGADVRDILELGGPEGDAASGTISKKDIINPDKKKSKKSSETLTFKRPEGMHREVYALLYSDKKDAPP
LLPSDTGQGYRTVKAKLGSKKVRPWKWMPFTNPARKDGAMFFHWRRAAEEGKDYPFARFNKTVQVPVYSE
QEYQLYLHDDAWTKAETDHLFDLSRRFDLRFVVIHDRYDHQQFKKRSVEDLKERYYHICAKLANVRAVPG
TDLKIPVFDAGHERRRKEQLERLYNRTPEQVAEEEYLLQELRKIEARKKEREKRSQDLQKLITAADTTAE
QRRTERKAPKKKLPQKKEAEKPAVPETAGIKFPDFKSAGVTLRSQRMKLPSSVGQKKIKALEQMLLELGV
ELSPTPTEELVHMFNELRSDLVLLYELKQACANCEYELQMLRHRHEALARAGVLGGPATPASGPGPASAE
PAVTEPGLGPDPKDTIIDVVGAPLTPNSRKRRESASSSSSVKKAKKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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