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Report for CCDS5895.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5895.1 Public Homo sapiens 7 ZNF282 24 110 108 CCDS HistoryNCBI Gene:8427Re-query CCDS DB by CCDS ID:5895.1Re-query CCDS DB by GeneID:8427See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5895.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000610704.5 ENSP00000477841.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000610704.5Link to Ensembl Protein Viewer:ENSP00000477841.1Re-query CCDS DB by Nucleotide ID:ENST00000610704Re-query CCDS DB by Protein ID:ENSP00000477841
Original member Current member NCBI NM_003575.4 NP_003566.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003575.4Link to Protein Sequence:NP_003566.1Re-query CCDS DB by Nucleotide ID:NM_003575Re-query CCDS DB by Protein ID:NP_003566Link to BLAST:NP_003566.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003566.1 671 Q9UDV7-1 671 100% 0 0

Chromosomal Locations for CCDS 5895.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 149195590 149195754 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149198333 149198752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149206696 149206822 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149207351 149207470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149210585 149210704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149212358 149212471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149213701 149213814 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 149223812 149224647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2016 nt):
ATGCAGTTTGTGTCAACACGGCCGCAGCCTCAGCAGCTGGGCATCCAGGGCCTGGGGCTGGACAGCGGGA
GCTGGAGCTGGGCCCAGGCTCTGCCCCCGGAGGAGGTCTGCCACCAGGAGCCGGCGCTGCGCGGGGAAAT
GGCCGAGGGAATGCCGCCCATGCAGGCTCAAGAATGGGACATGGACGCCCGGCGGCCAATGCCTTTTCAG
TTCCCACCCTTTCCAGATAGGGCACCTGTCTTCCCCGACCGCATGATGCGAGAGCCCCAGTTGCCCACAG
CAGAGATCTCACTCTGGACTGTGGTGGCTGCCATTCAGGCTGTGGAGAGGAAGGTGGATGCCCAGGCCAG
CCAGCTGCTGAACCTGGAGGGGCGCACGGGGACAGCCGAGAAGAAGCTGGCCGACTGTGAAAAGACGGCC
GTGGAATTTGGGAACCACATGGAGAGCAAGTGGGCCGTGCTGGGGACCCTGCTGCAGGAGTACGGGCTGC
TGCAGAGGCGGCTGGAGAACTTGGAGAACTTGCTGCGCAACAGGAACTTCTGGGTCCTGCGGCTGCCCCC
GGGCAGCAAGGGGGAGGCCCCCAAGGTTCCAGTGACTTTTGTCGACATTGCTGTGTACTTCTCCGAAGAC
GAGTGGAAGAACTTGGACGAATGGCAGAAGGAGCTTTATAACAACCTTGTTAAGGAGAACTACAAAACCC
TCATGTCCCTGGACGCGGAGGGCTCAGTCCCCAAGCCAGATGCTCCAGTCCAGGCTGAGCCCAGGGAAGA
ACCTTGTGTGTGGGAGCAGCGCCACCCCGAAGAGAGAGAAATCCCAATGGATCCCGAAGCAGGAGCAGAG
CCCCTGGTGCCTGCGCAGGATGCGTCCTCCCAGGTGAAGCGTGAGGACACCCTGTGTGTCCGGGGTCAGC
GGGGCCTGGAGGAAAGAGCCATCCCTACGGAATCCATTACCGACTCCCCAATTTCTGCCCAGGACCTCTT
GTCCCGGATTAAACAGGAGGAGCATCAGTGCGTGTGGGATCAGCAGGATTTGGCAGACAGAGATATTCCC
ACGGATCCCAATTCAGAGTCTCTCATCTCAGCACATGACATTTTGTCATGGATCAAGCAGGAGGAGCAGC
CATACCCATGGGGACCACGCGACTCAATGGACGGAGAGCTTGGATTAGACTCTGGCCCTAGTGACAGCCT
GCTGATGGTGAAGAACCCACCCCCGGCCCCGCCACAGCCCCAGCCCCAGCCCCAGCCACCGCAGCCGCAG
CTGCAGTCGCAGCCCCAGCCCCAGAGCCTGCCCCCCATCGCGGTGGCCGAGAACCCGGGCGGCCCCCCGA
GCCGAGGGCTGCTGGACGACGGTTTCCAGGTGCTGCCCGGGGAGCGTGGCTCCGGCGAGGCGCCGCCGGG
TGGGGACCGCAGCACCGGGGGCGGCGGGGGCGATGGGGGCGGTGGGGGCGGCGGCGCGGAGGCGGGGACG
GGGGCAGGCGGCGGCTGTGGCAGCTGCTGCCCTGGCGGGCTGCGGCGGAGCCTCCTCCTGCACGGCGCCC
GCAGCAAGCCCTACTCGTGCCCCGAGTGCGGCAAGAGCTTCGGCGTGCGCAAGAGCCTCATCATCCACCA
CCGCAGCCACACCAAGGAGCGGCCCTACGAGTGCGCTGAGTGCGAGAAGAGCTTCAACTGCCACTCGGGC
CTCATCCGCCACCAGATGACGCACCGCGGCGAGCGGCCCTACAAGTGCTCGGAGTGCGAGAAGACCTACA
GCCGTAAGGAGCACCTGCAGAACCACCAGCGGCTGCACACGGGCGAGCGGCCTTTCCAATGTGCACTGTG
CGGCAAGAGCTTCATCCGCAAGCAGAACCTGCTCAAGCACCAGCGCATCCACACGGGCGAGCGCCCCTAC
ACGTGCGGCGAGTGCGGCAAGAGCTTCCGCTACAAGGAGTCGCTCAAGGACCACCTGCGCGTGCACAGCG
GCGGCCCGGGCCCCGGCGCCCCACGGCAGCTCCCGCCGCCTCCTGAGCGAGACTAG

Translation (671 aa):
MQFVSTRPQPQQLGIQGLGLDSGSWSWAQALPPEEVCHQEPALRGEMAEGMPPMQAQEWDMDARRPMPFQ
FPPFPDRAPVFPDRMMREPQLPTAEISLWTVVAAIQAVERKVDAQASQLLNLEGRTGTAEKKLADCEKTA
VEFGNHMESKWAVLGTLLQEYGLLQRRLENLENLLRNRNFWVLRLPPGSKGEAPKVPVTFVDIAVYFSED
EWKNLDEWQKELYNNLVKENYKTLMSLDAEGSVPKPDAPVQAEPREEPCVWEQRHPEEREIPMDPEAGAE
PLVPAQDASSQVKREDTLCVRGQRGLEERAIPTESITDSPISAQDLLSRIKQEEHQCVWDQQDLADRDIP
TDPNSESLISAHDILSWIKQEEQPYPWGPRDSMDGELGLDSGPSDSLLMVKNPPPAPPQPQPQPQPPQPQ
LQSQPQPQSLPPIAVAENPGGPPSRGLLDDGFQVLPGERGSGEAPPGGDRSTGGGGGDGGGGGGGAEAGT
GAGGGCGSCCPGGLRRSLLLHGARSKPYSCPECGKSFGVRKSLIIHHRSHTKERPYECAECEKSFNCHSG
LIRHQMTHRGERPYKCSECEKTYSRKEHLQNHQRLHTGERPFQCALCGKSFIRKQNLLKHQRIHTGERPY
TCGECGKSFRYKESLKDHLRVHSGGPGPGAPRQLPPPPERD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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