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Report for CCDS23766.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23766.1 Public Mus musculus 10 Hey2 23 108 98 CCDS HistoryNCBI Gene:15214Re-query CCDS DB by CCDS ID:23766.1See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23766.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000019924.8 ENSMUSP00000019924.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000019924.8Link to Ensembl Protein Viewer:ENSMUSP00000019924.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000019924Re-query CCDS DB by Protein ID:ENSMUSP00000019924
Original member Current member NCBI NM_013904.1 NP_038932.1 Accepted alive Link to Nucleotide Sequence:NM_013904.1Link to Protein Sequence:NP_038932.1Re-query CCDS DB by Nucleotide ID:NM_013904Re-query CCDS DB by Protein ID:NP_038932Link to BLAST:NP_038932.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_038932.1 339 Q9QUS4 339 100% 0 0

Chromosomal Locations for CCDS 23766.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 30833736 30834427 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30837475 30837556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30840391 30840474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30840604 30840682 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 30842566 30842648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1020 nt):
ATGAAGCGCCCTTGTGAGGAAACGACCTCCGAAAGCGACCTGGACGAGACCATCGACGTGGGGAGCGAGA
ACAATTACCCTGGGCACGCTACAAGCTCAGTGATGAGGTCCAATTCACCGACAACTACCTCTCAGATTAT
GGCAAGAAAGAAAAGGAGAGGGATCATAGAAAAAAGGCGTCGGGATCGAATAAATAACAGTTTATCTGAA
TTGAGAAGACTAGTGCCAACAGCTTTTGAAAAACAAGGATCTGCCAAGTTAGAAAAGGCTGAAATATTGC
AAATGACAGTGGATCATTTGAAGATGCTCCAGGCTACAGGGGGTAAAGGCTACTTTGATGCCCATGCTCT
TGCCACAGACTTCATGAGCATTGGATTCCGAGAGTGCTTGACAGAAGTGGCTAGGTACCTAAGCTCAGTG
GAAGGCCTTGACCCGTCGGACCCACTACGCGTGCGCCTTGTCTCTCATCTCAGCACCTGTGCCTCCCAGC
GGGAGGCAGCAGTGATGACATCCTCCATGGCCCACCACCATCACCCCTTGCACCCTCACCACTGGGCAGC
TGCTTTCCACCATCTCCCCACAGCCCTGCTCCAGCCCAATGGACTCCACACATCAGAGTCAACCCCATGT
CGCCTATCCACATCTTCAGAAGTGCCTTCTGCTCATGGCTCTGCTCTCCTCACAGCAACGTTTGCCCATG
CAGATTCTGCTCTTCGGATGCCATCAGGGGGCACCGTTGCACCCTGCGTGCCACCTCTCTCCACCTCTCT
TCTGTCTCTTTCGGCCACTGTGCATGCCGCAGCTGCAGCAGCCACTGCAGCTGCACACAGCTTCCCTCTG
TCCTTCGCAGGGGCTTTTCCCATGCTCCCGTCCAATGCAGCGGCAGCAGCCGCTGTTGCTGCTGCAACAG
CAATCAGCCCACCCTTGTCGGTATCCGCAGCCTCCAGTCCTCAGCAGACAAGCACTGGGACAAACAATAA
ACCTTACCAACCCTGGGGGACAGAAGTTGGAGCCTTTTAA

Translation (339 aa):
MKRPCEETTSESDLDETIDVGSENNYPGHATSSVMRSNSPTTTSQIMARKKRRGIIEKRRRDRINNSLSE
LRRLVPTAFEKQGSAKLEKAEILQMTVDHLKMLQATGGKGYFDAHALATDFMSIGFRECLTEVARYLSSV
EGLDPSDPLRVRLVSHLSTCASQREAAVMTSSMAHHHHPLHPHHWAAAFHHLPTALLQPNGLHTSESTPC
RLSTSSEVPSAHGSALLTATFAHADSALRMPSGGTVAPCVPPLSTSLLSLSATVHAAAAAATAAAHSFPL
SFAGAFPMLPSNAAAAAAVAAATAISPPLSVSAASSPQQTSTGTNNKPYQPWGTEVGAF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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