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Report for CCDS46767.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46767.1 Public Homo sapiens 3 FGD5 24 110 108 CCDS HistoryNCBI Gene:152273Re-query CCDS DB by CCDS ID:46767.1See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46767.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000285046.10 ENSP00000285046.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000285046.10Link to Ensembl Protein Viewer:ENSP00000285046.5Re-query CCDS DB by Nucleotide ID:ENST00000285046Re-query CCDS DB by Protein ID:ENSP00000285046
Original member Current member NCBI NM_152536.4 NP_689749.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152536.4Link to Protein Sequence:NP_689749.3Re-query CCDS DB by Nucleotide ID:NM_152536Re-query CCDS DB by Protein ID:NP_689749Link to BLAST:NP_689749.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689749.3 1462 Q6ZNL6-1 1462 100% 0 0

Chromosomal Locations for CCDS 46767.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 14819072 14821596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14864128 14864260 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14880572 14880630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14880742 14880772 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14897509 14897669 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14897939 14898095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14898739 14898826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14900403 14900453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14901003 14901061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14907640 14907711 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14910861 14910929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14917249 14917332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14918754 14918833 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14921918 14922017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14922411 14922548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14923046 14923175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14924008 14924138 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14926070 14926198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14932577 14932731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 14933131 14933167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4389 nt):
ATGTTCAGGGGTCCGAAGCCCCCCATTGCCCCCAAGCCCAGGCTGACTGCCCCAAACGAGTGGAGAGCCA
GTGTGTACCTGAATGACAGCTTGAACAAATGCAGCAACGGGCGGCTGCCCTGTGTAGACAGGGGGCTTGA
TGAGGGGCCCCGGTCCATCCCAAAGTGCTCTGAGTCGGAGACCGACGAGGATTACATCGTGGTCCCCAGG
GTTCCGCTGAGGGAGGATGAACCCAAGGACGAGGGCAGTGTGGGGAACAAAGCCCTGGTGTCTCCCGAGT
CCTCTGCGGAAGAGGAAGAGGAGCGTGAAGAGGGAGGCGAGGCATGTGGCCTGGAGGGTACAGGAGCTGG
TGAGGATTCAGTGGCCCCTGCTGCTCCGGGTGCAGGAGCGCTGAGCAGGGAGGGTGAGGAAGGCACAGAC
CTTGCTCTTGAGGATGAAGGGGAGGGCTGCGCTGATGAGCCAGGGACACTGGAGCAGGTGTCCAGAAGTG
AGGAGGAAGAGAAGCTAGTGCAGCCACACAGGGAGTGCAGCCTGGAGGACAGTGGGCCTTGGGCTGGAGA
GGGGGTCTTCCAGAGCGACCTCCTCCTGCCTCACATCCATGGAGAGGACCAGGAGCCCCCCGACACCCCC
GGGGAGGCAGAGGAGGATGATGAGGAAGGCTGTGCCAGCACAGACCCAGCAGGGGCAGATGAGGGTTCGG
GTCCTGACAGGCCCACGGAGGACATGGGACAGGATGCTGAGGACACCAGTGAGGAGCCCCCTGAGAAGGA
GGAGCTGGCCGGGGTCCAGGAGGCAGAGACAGCCACAGACTGCCCTGAAGTTCTTGAGGAGGGATGTGAA
GAGGCCACGGGTGTCACAGGTGGGGAACAGGTTGACCTCAGTGAACCACCTGACCACGAGAAGAAAACCA
ACCAAGAAGTGGCAGCCGCCACCCTGGAGGACCATGCACAGGATGAGTCCGCCGAGGAGAGCTGCCAGAT
TGTCCCTTTTGAGAATGACTGCATGGAGGACTTCGTGACTTCCCTCACAGGAAGCCCCTATGAGTTCTTC
CCAACTGAGAGCACCTCTTTTTGCAGCGAGAGCTGTTCTCCTCTTTCTGAATCAGCGAAAGGTTTAGAAT
CAGAGCAGGCACCAAAGCTGGGGCTGCGTGCGGAGGAGAACCCCATGGTGGGGGCTTTGTGTGGCCAGTG
TGGCTCCCTACAGGGTGGAGCGGCCGAGGGTCCCGCAGCCCCTGATGTGGTGGTCGTGCTGGAGGAGGAG
GCCTTGGATGATGCACTGGCCAACCCCTATGTGATGGGAGTGGGCCTGCCCGGTCAGGCGGCCCCTGGAG
AAGGAGGGCAGGCTGCATCGGACGCCCTGGGTGGTTATGGCTCGAAAGAAGAATTGAACTGTGAGGCAGA
GGGTGGCCTGGTTCCCGCGGACAGGAAGAACACCAGCACGAGGGTCCGGCCCCACTCTGGGAAGGTGGCC
GGCTATGTCCCAGAAACCGTCCCTGAAGAAACCGGACCTGAGGCGGGCTCGTCAGCCCCTGGCATTGGAG
GTGCCGCAGAGGAGGTGGGAAAGACGCTTTTGTCATTGGAGGGGAAGCCCTTGGAAGCCAGCAGGGCCTT
GCCAGCAAAGCCCAGGGCCTTTACTTTATACCCTCGGTCGTTCTCCGTGGAAGGCCGAGAGATTCCAGTG
TCCGTGTACCAGGAGCCTGAGGGGTCAGGGTTGGATGACCACAGGATAAAGAGGAAAGAGGACAATCTCT
CTCTGTCGTGTGTAATTGGCTCCTCTGGGAGTTTCTCCCAGAGAAACCACCTTCCGTCCAGCGGCACCTC
CACGCCTTCTTCCATGGTCGACATCCCACCTCCTTTCGACCTGGCCTGCATCACCAAGAAGCCCATCACA
AAGAGCTCTCCCTCACTCCTGATCGAGAGCGACTCCCCGGACAAGTACAAGAAGAAGAAGTCATCCTTTA
AGCGCTTCCTGGCACTGACGTTTAAGAAGAAGACGGAGAACAAATTGCATGTGGATGTGAACGTGTCTTC
CTCTAGGTCCTCTTCAGAGTCCAGCTACCACGGGCCTTCCAGGATTCTGGAAGTTGACCGGAGAAGCCTC
AGCAACTCCCCTCAGCTTAAGTCTCGGACTGGGAAGCTCCGGGCTTCTGAATCCCCCTCCTCCCTCATCT
TTTATAGAGATGGCAAGAGGAAAGGTGTCCCCTTCAGCAGGACGGTGTCCAGAGTGGAGTCCTTTGAAGA
CCGCTCCCGGCCGCCCTTCCTGCCCTTGCCACTGACCAAGCCACGGTCCATCTCCTTCCCCAGCGCTGAC
ACTTCAGACTATGAGAACATTCCAGCCATGAACTCGGACTATGAGAATATCCAGATTCCACCCCGGAGAC
CTGCCAGGGCTGGCGCGTTCACGAAGCTGTTTGAAGATCAGAGCAGAGCCCTGTCCACAGCAAACGAAAA
TGATGGCTACGTGGACATGAGCAGCTTCAACGCCTTTGAGAGCAAACAGCAGAGTGCAGACCAGGACGCA
GAAAGCGCCTACACAGAGCCCTACAAAGTCTGTCCCATCTCGTCGGCAGCCCCCAAAGAGGACCTTACGT
CGGATGAAGAGCAGAGAAGCTCGGAGGAGGAGGACAGTGCTTCAAGAGACCCCAGTGTCACCCACAAGGT
GGAAGGACAGTCCAGAGCCCTTGTCATCGCACAGGAACTGCTATCTTCAGAGAAAGCATACGTGGAGATG
CTCCAGCACTTAAATCTGGATTTCCATGGAGCTGTCATGAGGGCCTTGGATGACATGGACCATGAAGGCA
GAGACACATTGGCCCGGGAGGAGCTGAGGCAGGGCCTGAGTGAACTCCCAGCCATCCACGACCTTCATCA
AGGCATCCTGGAGGAGCTGGAGGAAAGGCTGTCAAATTGGGAGAGCCAGCAGAAGGTAGCTGACGTCTTC
CTGGCCCGGGAGCAGGGGTTTGATCACCACGCCACTCACATCCTGCAGTTCGACAGGTACCTAGGTCTGC
TCAGTGAGAATTGCCTCCACTCTCCCCGGCTGGCAGCTGCTGTCCGTGAATTTGAGCAGAGTGTACAAGG
AGGCAGCCAGACTGCGAAGCATCGGCTGCTGCGGGTGGTTCAACGCCTCTTCCAGTACCAAGTGCTCCTC
ACAGACTATTTAAACAACCTTTGTCCGGACTCCGCCGAGTACGACAACACACAGGGTGCACTGAGCCTCA
TCTCCAAAGTCACAGACCGTGCCAACGACAGCATGGAGCAAGGGGAAAACCTGCAGAAGCTGGTCCACAT
TGAGCACAGCGTCCGGGGCCAAGGGGATCTCCTCCAGCCAGGAAGGGAGTTTCTGAAGGAAGGGACGCTG
ATGAAAGTAACAGGGAAAAACAGACGGCCCCGGCACCTATTTCTGATGAACGATGTGCTCCTGTACACCT
ATCCCCAGAAGGATGGGAAGTACCGGCTGAAGAACACATTGGCTGTGGCCAACATGAAGGTCAGCCGCCC
TGTGATGGAGAAAGTGCCCTACGCTCTAAAGATTGAGACTTCCGAGTCCTGCCTGATGCTGTCTGCGAGC
TCCTGTGCAGAGAGGGACGAGTGGTATGGCTGTCTGAGCAGAGCCCTCCCTGAGGACTACAAGGCCCAGG
CGCTGGCTGCATTCCACCATAGCGTGGAGATACGAGAGAGGCTGGGGGTTAGCCTTGGGGAGAGGCCCCC
CACCCTGGTGCCTGTCACACACGTCATGATGTGCATGAACTGCGGCTGCGACTTCTCCCTCACCCTGCGG
CGTCATCACTGTCACGCCTGTGGCAAGATCGTGTGCCGGAACTGTTCGCGGAACAAGTACCCGCTGAAGT
ACCTGAAGGACAGGATGGCCAAGGTCTGCGACGGCTGCTTCGGGGAGCTGAAGAAGCGGGGCAGGGCTGT
CCCGGGCCTGATGAGAGAGCGGCCTGTGAGCATGAGCTTCCCGCTGTCTTCACCCCGCTTCTCGGGCAGT
GCCTTTTCATCCGTCTTCCAGAGCATTAACCCCTCGACCTTCAAGAAGCAGAAGAAAGTCCCTTCAGCCC
TGACAGAGGTGGCTGCCTCTGGAGAGGGCTCTGCCATCAGTGGCTATCTCAGCCGGTGTAAGAGGGGCAA
GCGGCACTGGAAGAAGCTCTGGTTTGTCATCAAAGGCAAAGTTCTCTACACCTACATGGCCAGTGAGGAC
AAAGTGGCCTTGGAGAGTATGCCTCTGCTAGGCTTCACCATTGCTCCAGAAAAGGAAGAGGGCAGCAGTG
AAGTAGGACCTATTTTTCACCTTTACCACAAGAAAACCCTATTTTATAGCTTCAAAGCAGAAGATACCAA
TTCAGCTCAGAGGTGGATCGAGGCCATGGAAGATGCGAGTGTGTTATAG

Translation (1462 aa):
MFRGPKPPIAPKPRLTAPNEWRASVYLNDSLNKCSNGRLPCVDRGLDEGPRSIPKCSESETDEDYIVVPR
VPLREDEPKDEGSVGNKALVSPESSAEEEEEREEGGEACGLEGTGAGEDSVAPAAPGAGALSREGEEGTD
LALEDEGEGCADEPGTLEQVSRSEEEEKLVQPHRECSLEDSGPWAGEGVFQSDLLLPHIHGEDQEPPDTP
GEAEEDDEEGCASTDPAGADEGSGPDRPTEDMGQDAEDTSEEPPEKEELAGVQEAETATDCPEVLEEGCE
EATGVTGGEQVDLSEPPDHEKKTNQEVAAATLEDHAQDESAEESCQIVPFENDCMEDFVTSLTGSPYEFF
PTESTSFCSESCSPLSESAKGLESEQAPKLGLRAEENPMVGALCGQCGSLQGGAAEGPAAPDVVVVLEEE
ALDDALANPYVMGVGLPGQAAPGEGGQAASDALGGYGSKEELNCEAEGGLVPADRKNTSTRVRPHSGKVA
GYVPETVPEETGPEAGSSAPGIGGAAEEVGKTLLSLEGKPLEASRALPAKPRAFTLYPRSFSVEGREIPV
SVYQEPEGSGLDDHRIKRKEDNLSLSCVIGSSGSFSQRNHLPSSGTSTPSSMVDIPPPFDLACITKKPIT
KSSPSLLIESDSPDKYKKKKSSFKRFLALTFKKKTENKLHVDVNVSSSRSSSESSYHGPSRILEVDRRSL
SNSPQLKSRTGKLRASESPSSLIFYRDGKRKGVPFSRTVSRVESFEDRSRPPFLPLPLTKPRSISFPSAD
TSDYENIPAMNSDYENIQIPPRRPARAGAFTKLFEDQSRALSTANENDGYVDMSSFNAFESKQQSADQDA
ESAYTEPYKVCPISSAAPKEDLTSDEEQRSSEEEDSASRDPSVTHKVEGQSRALVIAQELLSSEKAYVEM
LQHLNLDFHGAVMRALDDMDHEGRDTLAREELRQGLSELPAIHDLHQGILEELEERLSNWESQQKVADVF
LAREQGFDHHATHILQFDRYLGLLSENCLHSPRLAAAVREFEQSVQGGSQTAKHRLLRVVQRLFQYQVLL
TDYLNNLCPDSAEYDNTQGALSLISKVTDRANDSMEQGENLQKLVHIEHSVRGQGDLLQPGREFLKEGTL
MKVTGKNRRPRHLFLMNDVLLYTYPQKDGKYRLKNTLAVANMKVSRPVMEKVPYALKIETSESCLMLSAS
SCAERDEWYGCLSRALPEDYKAQALAAFHHSVEIRERLGVSLGERPPTLVPVTHVMMCMNCGCDFSLTLR
RHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGELKKRGRAVPGLMRERPVSMSFPLSSPRFSGS
AFSSVFQSINPSTFKKQKKVPSALTEVAASGEGSAISGYLSRCKRGKRHWKKLWFVIKGKVLYTYMASED
KVALESMPLLGFTIAPEKEEGSSEVGPIFHLYHKKTLFYSFKAEDTNSAQRWIEAMEDASVL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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