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Report for CCDS33677.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33677.1 Public Homo sapiens 22 ZBED4 24 110 108 CCDS HistoryNCBI Gene:9889Re-query CCDS DB by CCDS ID:33677.1Re-query CCDS DB by GeneID:9889See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33677.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000216268.6 ENSP00000216268.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000216268.6Link to Ensembl Protein Viewer:ENSP00000216268.4Re-query CCDS DB by Nucleotide ID:ENST00000216268Re-query CCDS DB by Protein ID:ENSP00000216268
Original member Current member NCBI NM_014838.3 NP_055653.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014838.3Link to Protein Sequence:NP_055653.2Re-query CCDS DB by Nucleotide ID:NM_014838Re-query CCDS DB by Protein ID:NP_055653Link to BLAST:NP_055653.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055653.2 1171 O75132 1171 100% 0 0

Chromosomal Locations for CCDS 33677.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 49883663 49887178 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3516 nt):
ATGGAGAATAACTTGAAAACTTGTCCCAAAGAGGACGGTGATTTCGTTTCTGATAAAATAAAGTTTAAAA
TAGAAGAGGAAGATGATGATGGAATTCCTCCTGATAGTTTGGAAAGAATGGACTTTAAAAGCGAGCAGGA
GGACATGAAGCAGACAGACAGCGGTGGGGAGCGAGCGGGCCTCGGTGGGACGGGTTGCAGCTGCAAGCCC
CCGGGGAAGTACTTGTCTGCAGAGAGTGAGGATGACTATGGCGCGCTGTTCTCCCAGTACAGCAGCACCC
TATACGACGTGGCCATGGAGGCCGTGACCCAGAGCCTCCTTTCCAGCCGGAACATGAGCTCCAGGAAGAA
GTCTCCAGCCTGGAAGCATTTTTTTATCTCTCCCCGAGACAGCACTAAAGCAATATGCATGTACTGTGTG
AAGGAGTTCAGCAGAGGCAAAAACGAGAAAGACTTGAGTACCAGTTGTCTCATGAGGCACGTGAGGCGCG
CACACCCGACCGTGCTCATTCAGGAAAATGGCAGTGTGTCTGCCGTGTCCTCGTTCCCCTCTCCCTCACT
CCTGCTTCCACCACAGCCTGCGGACGCGGGTGACCTCAGCACCATCCTCTCACCCATCAAACTTGTCCAG
AAAGTGGCGTCTAAGATCCCGTCCCCCGATCGAATAACAGAGGAGTCTGTGTCTGTAGTTTCTTCTGAAG
AAATCTCCTCTGACATGTCCGTTTCGGAGAAGTGCGGCAGAGAAGAAGCCCTGGTGGGGTCGTCTCCCCA
CCTCCCTGCTCTCCATTACGATGAACCTGCAGAGAACTTAGCGGAGAAGAGCCTTCCACTTCCAAAGAGC
ACCTCTGGGTCCAGGAGAAGGTCCGCTGTCTGGAAGCACTTCTACCTGTCGCCACTGGACAACTCCAAAG
CTGTCTGCATTCACTGCATGAACGAGTTCAGCCGGGGGAAGAATGGGAAGGACCTGGGCACGAGCTGCCT
CATCAGGCACATGTGGAGGGCACACCGCGCCATCGTGTTGCAGGAGAACGGGGGCACGGGCATCCCGCCA
CTGTACTCCACCCCTCCCACTCTGCTGCCTTCCTTGCTGCCGCCGGAGGGGGAGCTCAGCTCTGTGTCCT
CGTCTCCAGTAAAGCCGGTCAGAGAGTCCCCTTCGGCCTCCTCCTCCCCTGACAGGCTGACTGAGGACTT
GCAGTCTCACTTGAACCCTGGAGATGGGCTGATGGAAGACGTGGCGGCCTTCTCATCTTCCGATGACATA
GGGGAGGCCTCGGCGTCCTCTCCTGAGAAGCAGCAGGCTGATGGGCTGAGTCCTAGATTGTTTGAATCTG
GCGCCATCTTCCAGCAGAATAAAAAGGTCATGAAAAGACTGAAGTCGGAGGTCTGGCATCACTTCTCCCT
GGCCCCCATGGACAGCCTCAAGGCCGAGTGTCGGTACTGCGGCTGTGCCATCAGCCGGGGGAAGAAGGGT
GATGTGGGCACCAGCTGCCTGATGAGACATCTCTACCGGCGCCATCCAGAAGTTGTCGGGAGCCAGAAGG
GCTTCCTGGGTGCAAGTCTGGCAAACTCTCCGTATGCCACTTTGGCCTCTGCAGAAAGTTCCTCTTCCAA
ATTGACTGACTTGCCAACAGTGGTCACAAAAAACAATCAAGTTATGTTTCCTGTTAATAGCAAAAAGACC
TCGAAGCTGTGGAATCATTTTTCTATTTGCTCCGCAGACTCCACAAAAGTCGTGTGCTTGCACTGTGGCC
GGACCATCAGCCGGGGGAAGAAGCCGACTAACTTGGGTACCAGCTGTCTTCTGAGACATTTACAGCGGTT
CCATAGCAACGTGCTGAAAACTGAGGTCTCGGAGACGGCTCGGCCCTCCTCTCCGGACACCCGGGTGCCG
CGGGGCACAGAATTATCAGGCGCTTCCTCTTTTGATGACACCAATGAGAAGTTTTACGATTCTCACCCAG
TTGCCAAAAAAATCACAAGTCTCATAGCTGAAATGATTGCACTTGACCTCCAGCCATATTCTTTTGTAGA
CAACGTTGGCTTTAACAGGCTGCTTGAATACTTGAAACCTCAGTACTCCCTCCCCGCCCCTTCCTACTTC
TCCAGGACAGCTATCCCAGGTATGTATGATAATGTGAAGCAGATAATTATGTCCCACCTTAAGGAAGCTG
AGAGTGGTGTGATCCACTTCACGTCTGGAATATGGATGAGTAACCAGACCCGTGAGTACCTGACCCTCAC
GGCCCACTGGGTTTCCTTCGAGTCGCCAGCCCGGCCGCGCTGTGACGACCACCACTGCTCGGCGCTGTTG
GACGTGTCGCAGGTGGACTGCGACTACAGTGGCAACAGCATTCAGAAGCAGCTGGAGTGCTGGTGGGAAG
CGTGGGTGACCTCCACCGGCCTTCAGGTGGGCATCACCGTCACCGACAACGCCAGCATCGGGAAGACGCT
GAACGAGGGGGAGCACTCGAGCGTGCAGTGCTTCAGCCATACGGTGAACCTGATCGTCAGCGAGGCCATT
AAGAGCCAGCGGATGGTGCAGAACCTGCTGAGCCTCGCCCGGAAGATCTGCGAGCGGGTGCACCGGTCGC
CCAAGGCGAAGGAGAAACTGGCCGAGCTGCAGAGGGAGTACGCGCTGCCTCAGCATCACCTCATCCAGGA
CGTCCCGTCCAAGTGGAGCACTTCCTTCCACATGCTCGAGCGGCTCATTGAGCAGAAAAGGGCCATTAAC
GAGATGTCCGTCGAGTGTAACTTCCGAGAGCTGATCAGCTGCGACCAGTGGGAGGTCATGCAGTCCGTGT
GCCGTGCGCTAAAGCCCTTCGAGGCTGCGAGCCGGGAGATGAGCACGCAGATGTCCACCCTCAGCCAGGT
CATCCCCATGGTACACATCCTCAACAGGAAGGTGGAGATGCTCTTCGAGGAGACGATGGGCATCGACACC
ATGCTGCGCTCTCTGAAGGAGGCCATGGTGAGCCGCCTGTCTGCCACCCTCCACGACCCGCGGTACGTCT
TCGCCACGCTGCTGGATCCTCGCTACAAGGCCTCCCTGTTTACGGAGGAGGAGGCGGAGCAGTACAAACA
GGATTTAATCAGGGAACTCGAACTCATGAATTCTACCTCAGAGGACGTGGCTGCCTCCCACAGGTGTGAT
GCTGGCTCCCCGTCGAAAGACTCTGCCGCAGAGGAGAACCTGTGGTCACTTGTGGCCAAGGTGAAGAAGA
AAGACCCAAGAGAAAAGCTGCCTGAAGCCATGGTGCTTGCGTATCTGGAGGAGGAGGTGCTTGAACACAG
CTGTGACCCGCTCACCTACTGGAACCTGAAGAAGGCGTCCTGGCCGGGGCTGTCCGCGCTGGCCGTCAGA
TTTTTGGGCTGCCCCCCAAGCATCGTCCCTTCAGAAAAGCTGTTCAACACACCCACTGAGAACGGTAGCC
TTGGCCAATCCAGGCTCATGATGGAACATTTTGAAAAACTTATCTTTTTGAAAGTGAATCTTCCCTTAAT
ATACTTTCAGTATTGA

Translation (1171 aa):
MENNLKTCPKEDGDFVSDKIKFKIEEEDDDGIPPDSLERMDFKSEQEDMKQTDSGGERAGLGGTGCSCKP
PGKYLSAESEDDYGALFSQYSSTLYDVAMEAVTQSLLSSRNMSSRKKSPAWKHFFISPRDSTKAICMYCV
KEFSRGKNEKDLSTSCLMRHVRRAHPTVLIQENGSVSAVSSFPSPSLLLPPQPADAGDLSTILSPIKLVQ
KVASKIPSPDRITEESVSVVSSEEISSDMSVSEKCGREEALVGSSPHLPALHYDEPAENLAEKSLPLPKS
TSGSRRRSAVWKHFYLSPLDNSKAVCIHCMNEFSRGKNGKDLGTSCLIRHMWRAHRAIVLQENGGTGIPP
LYSTPPTLLPSLLPPEGELSSVSSSPVKPVRESPSASSSPDRLTEDLQSHLNPGDGLMEDVAAFSSSDDI
GEASASSPEKQQADGLSPRLFESGAIFQQNKKVMKRLKSEVWHHFSLAPMDSLKAECRYCGCAISRGKKG
DVGTSCLMRHLYRRHPEVVGSQKGFLGASLANSPYATLASAESSSSKLTDLPTVVTKNNQVMFPVNSKKT
SKLWNHFSICSADSTKVVCLHCGRTISRGKKPTNLGTSCLLRHLQRFHSNVLKTEVSETARPSSPDTRVP
RGTELSGASSFDDTNEKFYDSHPVAKKITSLIAEMIALDLQPYSFVDNVGFNRLLEYLKPQYSLPAPSYF
SRTAIPGMYDNVKQIIMSHLKEAESGVIHFTSGIWMSNQTREYLTLTAHWVSFESPARPRCDDHHCSALL
DVSQVDCDYSGNSIQKQLECWWEAWVTSTGLQVGITVTDNASIGKTLNEGEHSSVQCFSHTVNLIVSEAI
KSQRMVQNLLSLARKICERVHRSPKAKEKLAELQREYALPQHHLIQDVPSKWSTSFHMLERLIEQKRAIN
EMSVECNFRELISCDQWEVMQSVCRALKPFEAASREMSTQMSTLSQVIPMVHILNRKVEMLFEETMGIDT
MLRSLKEAMVSRLSATLHDPRYVFATLLDPRYKASLFTEEEAEQYKQDLIRELELMNSTSEDVAASHRCD
AGSPSKDSAAEENLWSLVAKVKKKDPREKLPEAMVLAYLEEEVLEHSCDPLTYWNLKKASWPGLSALAVR
FLGCPPSIVPSEKLFNTPTENGSLGQSRLMMEHFEKLIFLKVNLPLIYFQY


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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