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Report for CCDS38774.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38774.1 Public Mus musculus 4 Cdc26 23 108 98 CCDS HistoryNCBI Gene:66440Re-query CCDS DB by CCDS ID:38774.1Re-query CCDS DB by GeneID:66440See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 38774.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000084525.11 ENSMUSP00000081573.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000084525.11Link to Ensembl Protein Viewer:ENSMUSP00000081573.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000084525Re-query CCDS DB by Protein ID:ENSMUSP00000081573
Original member Current member EBI ENSMUST00000107459.1 ENSMUSP00000103083.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000107459.1Link to Ensembl Protein Viewer:ENSMUSP00000103083.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000107459Re-query CCDS DB by Protein ID:ENSMUSP00000103083
Original member Current member EBI ENSMUST00000134727.7 ENSMUSP00000120496.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000134727.7Link to Ensembl Protein Viewer:ENSMUSP00000120496.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000134727Re-query CCDS DB by Protein ID:ENSMUSP00000120496
Original member Current member NCBI NM_001368241.1 NP_001355170.1 Accepted alive Link to Nucleotide Sequence:NM_001368241.1Link to Protein Sequence:NP_001355170.1Re-query CCDS DB by Nucleotide ID:NM_001368241Re-query CCDS DB by Protein ID:NP_001355170Link to BLAST:NP_001355170.1
Original member Current member NCBI NM_139291.4 NP_647452.1 Accepted alive Link to Nucleotide Sequence:NM_139291.4Link to Protein Sequence:NP_647452.1Re-query CCDS DB by Nucleotide ID:NM_139291Re-query CCDS DB by Protein ID:NP_647452Link to BLAST:NP_647452.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355170.1 85 Q99JP4 85 100% 0 0
NP_647452.1 85 Q99JP4 85 100% 0 0

Chromosomal Locations for CCDS 38774.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 62394845 62395021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 62402724 62402804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (258 nt):
ATGCTGCGACGGAAACCGACCCGCTTAGAGCTCAAGCTCGACGACATTGAGGAGTTTGAGAGCATTCGCA
AGGACCTGGAGGCCCGTAAGAAGCAGAAGGAAGATGTGGAAGGTGTAGGAACCAGCGATGGAGAAGGAGC
TGCTGGGCTCAGCAGTGACCCCAAAAGCCGGGAACAAATGATTAATGATCGAATTGGTTATAAACCCCAA
CTCAAGAGCAACAACCGCACATCTCAGTTTGGAAACTTTGAATTTTAG

Translation (85 aa):
MLRRKPTRLELKLDDIEEFESIRKDLEARKKQKEDVEGVGTSDGEGAAGLSSDPKSREQMINDRIGYKPQ
LKSNNRTSQFGNFEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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