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Report for CCDS6268.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6268.1 Public Homo sapiens 8 CFAP418 24 110 108 CCDS HistoryNCBI Gene:157657Re-query CCDS DB by CCDS ID:6268.1See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6268.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000286688.6 ENSP00000286688.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000286688.6Link to Ensembl Protein Viewer:ENSP00000286688.5Re-query CCDS DB by Nucleotide ID:ENST00000286688Re-query CCDS DB by Protein ID:ENSP00000286688
Original member Current member NCBI NM_177965.4 NP_808880.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_177965.4Link to Protein Sequence:NP_808880.1Re-query CCDS DB by Nucleotide ID:NM_177965Re-query CCDS DB by Protein ID:NP_808880Link to BLAST:NP_808880.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_808880.1 207 Q96NL8 207 100% 0 0

Chromosomal Locations for CCDS 6268.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 95247617 95247770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95252188 95252283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95259840 95259905 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95260468 95260532 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95263687 95263774 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 95269035 95269189 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (624 nt):
ATGGCGGAGGACCTGGACGAGCTCTTGGATGAAGTCGAGTCCAAGTTTTGCACACCTGACCTTCTAAGAC
GGGGTATGGTCGAGCAGCCCAAAGGCTGCGGCGGCGGCACCCACAGTAGCGACCGGAACCAAGCCAAGGC
GAAAGAGACGCTCAGATCAACAGAAACATTTAAAAAAGAAGATGATCTTGACAGTCTTATTAATGAAATA
CTTGAAGAGCCCAACTTGGACAAAAAACCCTCTAAATTAAAATCTAAATCTTCAGGTAACACATCTGTCA
GAGCTTCCATTGAAGGCCTTGGTAAAAGTTGCAGTCCGGTGTACCTTGGTGGAAGCTCTATTCCATGTGG
GATTGGAACAAATATTTCATGGAGAGCATGTGACCATCTGCGTTGTATAGCCTGTGATTTCTTGGTAGTC
AGCTATGATGACTATATGTGGGACAAATCGTGTGATTATCTGTTTTTCAGGAACAACATGCCAGAATTTC
ACAAATTAAAAGCAAAGTTGATAAAGAAGAAAGGAACACGGGCATATGCCTGCCAGTGTAGCTGGAGAAC
TATTGAAGAAGTGACTGACCTTCAGACAGATCATCAGCTTCGCTGGGTTTGTGGTAAACATTAA

Translation (207 aa):
MAEDLDELLDEVESKFCTPDLLRRGMVEQPKGCGGGTHSSDRNQAKAKETLRSTETFKKEDDLDSLINEI
LEEPNLDKKPSKLKSKSSGNTSVRASIEGLGKSCSPVYLGGSSIPCGIGTNISWRACDHLRCIACDFLVV
SYDDYMWDKSCDYLFFRNNMPEFHKLKAKLIKKKGTRAYACQCSWRTIEEVTDLQTDHQLRWVCGKH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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