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Report for CCDS43747.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
43747.2 Public Homo sapiens 8 SBSPON 24 110 108 CCDS HistoryNCBI Gene:157869Re-query CCDS DB by CCDS ID:43747.2See the combined annotation on chromosome 8 in Sequence Viewer

Public Note for CCDS 43747.1
The coding region has been updated to extend the N-terminus to one that is more supported by available transcript and conservation data.

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 43747.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000297354.7 ENSP00000297354.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000297354.7Link to Ensembl Protein Viewer:ENSP00000297354.6Re-query CCDS DB by Nucleotide ID:ENST00000297354Re-query CCDS DB by Protein ID:ENSP00000297354
Original member Current member NCBI NM_153225.4 NP_694957.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_153225.4Link to Protein Sequence:NP_694957.3Re-query CCDS DB by Nucleotide ID:NM_153225Re-query CCDS DB by Protein ID:NP_694957Link to BLAST:NP_694957.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_694957.3 264 Q8IVN8 264 100% 0 0

Chromosomal Locations for CCDS 43747.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 73067341 73067458 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 73069805 73069981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 73071780 73071870 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 73081019 73081213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 73092854 73093067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (795 nt):
ATGAGGACCCTGTGGATGGCGCTGTGCGCGCTGTCGCGGCTGTGGCCCGGGGCCCAGGCCGGCTGCGCCG
AGGCCGGGCGCTGCTGTCCCGGCCGGGACCCCGCCTGCTTCGCCCGCGGCTGGAGGCTGGACAGGGTCTA
CGGGACGTGTTTCTGCGACCAAGCCTGTCGCTTCACCGGGGACTGCTGCTTCGACTACGACAGGGCGTGC
CCAGCTCGCCCGTGCTTCGTGGGGGAATGGAGCCCCTGGAGTGGTTGTGCAGACCAGTGCAAGCCTACAA
CCCGTGTGCGGAGGCGCTCGGTGCAGCAGGAGCCTCAGAACGGCGGGGCGCCCTGCCCACCCCTGGAAGA
GAGAGCTGGCTGCCTGGAGTACTCCACCCCGCAGGGCCAGGACTGCGGGCACACCTATGTTCCTGCCTTT
ATAACTACCTCTGCATTCAACAAGGAGAGAACACGACAAGCTACGTCTCCACACTGGTCTACACACACAG
AGGATGCTGGATACTGTATGGAGTTTAAGACAGAGTCCTTGACTCCTCACTGTGCTCTGGAAAACTGGCC
CTTGACTAGATGGATGCAGTATCTCCGAGAGGGATACACGGTGTGTGTGGATTGTCAGCCTCCAGCTATG
AACTCTGTGAGCCTTCGTTGTTCTGGAGATGGCCTGGACTCCGATGGAAATCAGACTCTCCATTGGCAAG
CAATTGGTAATCCTCGGTGTCAAGGAACTTGGAAAAAAGTTCGGCGAGTAGACCAGTGTTCTTGTCCAGC
TGTTCACAGTTTTATTTTTATATAG

Translation (264 aa):
MRTLWMALCALSRLWPGAQAGCAEAGRCCPGRDPACFARGWRLDRVYGTCFCDQACRFTGDCCFDYDRAC
PARPCFVGEWSPWSGCADQCKPTTRVRRRSVQQEPQNGGAPCPPLEERAGCLEYSTPQGQDCGHTYVPAF
ITTSAFNKERTRQATSPHWSTHTEDAGYCMEFKTESLTPHCALENWPLTRWMQYLREGYTVCVDCQPPAM
NSVSLRCSGDGLDSDGNQTLHWQAIGNPRCQGTWKKVRRVDQCSCPAVHSFIFI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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