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Report for CCDS78648.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78648.1 Public Mus musculus 1 Ramp1 23 108 98 CCDS HistoryNCBI Gene:51801Re-query CCDS DB by CCDS ID:78648.1Re-query CCDS DB by GeneID:51801See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78648.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165855.7 ENSMUSP00000128679.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165855.7Link to Ensembl Protein Viewer:ENSMUSP00000128679.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000165855Re-query CCDS DB by Protein ID:ENSMUSP00000128679
Original member Current member NCBI NM_178401.3 NP_848488.2 Accepted alive Link to Nucleotide Sequence:NM_178401.3Link to Protein Sequence:NP_848488.2Re-query CCDS DB by Nucleotide ID:NM_178401Re-query CCDS DB by Protein ID:NP_848488Link to BLAST:NP_848488.2

Chromosomal Locations for CCDS 78648.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 1 (NC_000067.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 91180089 91180140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91196771 91196909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 91206397 91206517 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (312 nt):
ATGGCCCCGGGCCTGCGGGGCCTCCCGCGGTGCGGCCTCTGGCTGCTGCTGGCTCACCATCTCTTCATGG
TCACTGCCTGCCGGGACCCTGACTATGGGACTCTCATCCAGGAGCTGTGCCTCAGCCGCTTCAAGGAGAA
CATGGAGACTATTGGGAAGACGCTATGGTGTGACTGGGGAAAGACCATACAGGATCTGCATGCGCACTCC
CGCTCTGTTCTGGGCCTGCCACGGTGTGACCTGGTATTGTCAAGGCTACCGCCTAACTCTCATCACAGAA
TCTCGTTGGCTTCAGCTTCTGGTGATGCTTAG

Translation (103 aa):
MAPGLRGLPRCGLWLLLAHHLFMVTACRDPDYGTLIQELCLSRFKENMETIGKTLWCDWGKTIQDLHAHS
RSVLGLPRCDLVLSRLPPNSHHRISLASASGDA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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