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Report for CCDS50742.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
50742.1 Public Mus musculus 2 Abhd12 23 108 98 CCDS HistoryNCBI Gene:76192Re-query CCDS DB by CCDS ID:50742.1Re-query CCDS DB by GeneID:76192See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 50742.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056149.14 ENSMUSP00000053558.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056149.14Link to Ensembl Protein Viewer:ENSMUSP00000053558.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000056149Re-query CCDS DB by Protein ID:ENSMUSP00000053558
Original member Current member NCBI NM_024465.3 NP_077785.2 Accepted alive Link to Nucleotide Sequence:NM_024465.3Link to Protein Sequence:NP_077785.2Re-query CCDS DB by Nucleotide ID:NM_024465Re-query CCDS DB by Protein ID:NP_077785Link to BLAST:NP_077785.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077785.2 398 Q99LR1-1 398 100% 0 0

Chromosomal Locations for CCDS 50742.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 150833101 150833140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150834279 150834406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150835273 150835351 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150837352 150837434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150838315 150838394 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150838741 150838778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150839720 150839849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150842246 150842291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150843391 150843421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150846244 150846363 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150848352 150848457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150858360 150858484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 150904357 150904547 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1197 nt):
ATGAGGAAGCGGACCGAGCCCGTCACCTTGGAGCATGAGCGCTGCGCCGCCTCAGGCTCGTCCTCCTCCG
GCTCGGCCGCCGCGGCGCTGGACGCCGACTGCAGCTTGAAGCAGAACCTGCGTCTGGCGGGCAAGGGGAC
GGCAGAGCCGCACAGCGCATCCGACGCGGGCATGAAGCGGGCGCTGGGCAGACGAAAGAGCCTGTGGTTC
CGACTAAGGAAGATACTTCTCTGTGTTCTGGGGTTCTACATTGCCATTCCATTTCTTGTCAAACTGTGTC
CTGGGATACAGGCCAAACTGATATTCTTAAATTTCGTGAGGGTTCCCTATTTCATTGATTTAAAAAAACC
ACAGGATCAAGGTTTGAATCACACCTGCAATTACTACCTCCAGCCAGAGGATGATGTGACTATTGGAGTC
TGGCACACAATCCCCTCTGTCTGGTGGAAGAATGCCCAAGGGAAGGACCAGATGTGGTATGAGGATGCTC
TGGCTTCTAACCATGCCATCATACTATACCTGCATGGGAATGCAGGCACCAGAGGAGGTGACCACCGTGT
GGAGCTGTACAAGGTGCTGAGTTCCCTTGGCTACCACGTGGTCACCTTTGACTACAGAGGTTGGGGTGAC
TCAGTAGGAACACCATCGGAGCGAGGCATGACGTATGACGCACTCCATGTTTTTGACTGGATCAAAGCAA
GAAGTGGTGATAATCCTGTGTATATTTGGGGCCATTCACTGGGCACCGGAGTGGCAACAAATCTGGTACG
GCGCCTCTGTGAGCGAGAGACGCCACCAGATGCCCTTATATTGGAGTCTCCATTCACAAATATTCGTGAA
GAAGCAAAGAGTCATCCATTTTCAGTGATATACCGATACTTCCCTGGCTTTGACTGGTTCTTCCTCGACC
CCATTACAAGCAGTGGAATTAAATTTGCAAATGACGAAAATATGAAGCACATCTCCTGTCCTCTGCTCAT
CTTGCATGCCGAGGATGATCCAGTTGTGCCCTTTCATCTCGGTAGAAAGCTATACAACATTGCTGCACCA
TCTCGGAGTTTCCGAGACTTCAAAGTCCAGTTTATCCCCTTTCACTCAGACCTTGGCTACAGACATAAAT
ACATCTACAAGAGCCCAGAGCTTCCAAGGATACTGAGGGAATTCCTAGGGAAGTCGGAACCGGAACGCCA
GCACTGA

Translation (398 aa):
MRKRTEPVTLEHERCAASGSSSSGSAAAALDADCSLKQNLRLAGKGTAEPHSASDAGMKRALGRRKSLWF
RLRKILLCVLGFYIAIPFLVKLCPGIQAKLIFLNFVRVPYFIDLKKPQDQGLNHTCNYYLQPEDDVTIGV
WHTIPSVWWKNAQGKDQMWYEDALASNHAIILYLHGNAGTRGGDHRVELYKVLSSLGYHVVTFDYRGWGD
SVGTPSERGMTYDALHVFDWIKARSGDNPVYIWGHSLGTGVATNLVRRLCERETPPDALILESPFTNIRE
EAKSHPFSVIYRYFPGFDWFFLDPITSSGIKFANDENMKHISCPLLILHAEDDPVVPFHLGRKLYNIAAP
SRSFRDFKVQFIPFHSDLGYRHKYIYKSPELPRILREFLGKSEPERQH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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